Pairwise Alignments

Query, 393 a.a., chloramphenicol resistance protein from Agrobacterium fabrum C58

Subject, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  284 bits (726), Expect = 4e-81
 Identities = 152/376 (40%), Positives = 230/376 (61%), Gaps = 6/376 (1%)

Query: 5   IFALTIAAYAIGTTEFVIVGLLPTVANDLHITLPLAGLIVSVYALGVTFGAPILTALTGR 64
           +FAL I A+ IGTTEF  +GLLP +A  + +++P AG++++ YA+GV  GAPI+T L  R
Sbjct: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71

Query: 65  IERKPLLLGLMALFIVGNTAAALSPSYEMLLVARVIAAFAHGVFFSVGATIAADLVPENR 124
             ++  L+ LMA+F +GN  ++LSP Y  LL +R++ +  HG FF +GA +AA +VP+ +
Sbjct: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131

Query: 125 RASAIAMMFMGLTVAIVTGVPIGTYIGQIFGWRATFWAVGALGIVAFVAIAVLLPNTLKK 184
           +ASA+A MFMGLT+A + GVP  T+IGQ  GWR  F     LG++A  A+   LP   + 
Sbjct: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKGERG 191

Query: 185 APPASIFDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQDVTGFSESSVSLILVL 244
           + P  +  ++ V+    +L+  A T LG G  F  +T++AP+L ++TG S+  V+L LVL
Sbjct: 192 SVP-HVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVL 250

Query: 245 YGIAIAAGNIGGGKIANHNPVKALIGLFALQAIVLVIFSFTAVSPVLTLITLVALGFLSF 304
            G+    GN  GG++A+ +   A     A+ A++++       S +   I L+  G  +F
Sbjct: 251 IGVGFTLGNSLGGRLADWSLDGAAKIFLAVLALIMLAMPLVLGSHIGAAIALLVWGMFTF 310

Query: 305 ANVPGLQLYVVQLAKEHRPGAVDVASALNIAAFNLGIALGAWLGGVVVESPMGLGATPWV 364
           A VP LQ+ V+  A E    A  +AS++N+ AFNLG A+GA LGG V+   +G  A P  
Sbjct: 311 AVVPPLQMRVMTAAIE----APGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAVPMA 366

Query: 365 GAILVAVALLLTIWSG 380
           G +L A  LLL +W G
Sbjct: 367 GGVLAAAGLLL-VWLG 381



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 23/161 (14%)

Query: 200 GRLLIVFAMTALGYGGTFVAFTFLAPILQDVTGFSESSVSLILVLYGIAIAAGNIGGGKI 259
           GR+L   A+ A G G T      L P++      S  S  +++  Y I +  G       
Sbjct: 9   GRVLFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVG------- 61

Query: 260 ANHNPVKALI--------GLFALQAIVLVIFSFTAVSP-VLTLITLVALGFLSFANVPGL 310
               P+  L+         L AL AI  +    +++SP   TL+    +  L+     GL
Sbjct: 62  ---APIMTLLFSRFGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGL 118

Query: 311 QLYVVQ--LAKEHRPGAV-DVASALNIAAFNLGIALGAWLG 348
              V    + KE +  AV  +   L IA    G+    W+G
Sbjct: 119 GAVVAASVVPKEKQASAVATMFMGLTIANIG-GVPAATWIG 158