Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  130 bits (326), Expect = 4e-35
 Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 2/258 (0%)

Query: 1   MNWKCLTLTAAVLGVAAASPAMADQLDTITANKVLRCATFADVVPFAAPDPKTREMAGFD 60
           M    +   AA   +   + A ADQL  I     L         P    DPKTR++ G++
Sbjct: 1   MRLNLIAAAAAASALLLGTVAHADQLADIKKKGELVVGVLGTDEPATFIDPKTRQIVGYE 60

Query: 61  VDLCKAIAKELGVKAEIKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQFSDPYYLA 120
           VDL  AIAK++GVK  +K ++V AR+PE++ G VD+  A L + + R  QI FS   ++ 
Sbjct: 61  VDLVNAIAKKIGVKPVLKQIAVAARIPELQQGHVDLVAAGLTHNKEREAQIDFSLTTFVT 120

Query: 121 KEMLIVPVEDAGKKKSDYEGQRVASTKGSTSEMSIK--LNKSEPLTFQDTASAYLAVQQG 178
            +  IV  +    +     G++V + +G T E +I+  +   + +TF  +  A+ A+QQG
Sbjct: 121 GQKAIVKKDSGITEVPQLAGKKVLTIRGGTQEPNIRKAVPNVDVVTFDTSQQAFQALQQG 180

Query: 179 KARGMVANTMTTTKFVKESKTKGKPMRMIEEPMLYQPIGIGMAKDNPALTAKINEILRKL 238
           K  G V +     +   +   +     ++++ +  + + IG+ K   AL A +++ LR+L
Sbjct: 181 KGVGYVDDEAALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGETALKAVVDDTLREL 240

Query: 239 DADGEINTIWNKWLGPDT 256
           +  GE   I+ KW GP+T
Sbjct: 241 EKSGEAEKIFIKWYGPNT 258