Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  110 bits (276), Expect = 3e-29
 Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 8/261 (3%)

Query: 6   LTLTAAVLGVA-AASPAMADQLDTITANKVLRCATFADVVPFAAPDPKTREMAGFDVDLC 64
           L+  A  L +A A + A ADQLDTI A K +R A    V P+   D K     G DV+  
Sbjct: 16  LSALALALPLAFAGASAHADQLDTIMAAKKIRVAIDLAVPPYGLKDEKLNA-TGSDVETA 74

Query: 65  KAIAKELGVKAEIKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQFSDPYYLAKEML 124
           + +AK LG++ EI P +   R+P ++  + DI +++++ T  R + + FS PY     ++
Sbjct: 75  RLLAKSLGLELEIVPTTGANRIPFLQTDKADIVISSMSVTPEREKVVDFSVPYAAILAVV 134

Query: 125 IVPVEDAGKKKSDYEGQRVASTKGSTSEMSIKL---NKSEPLTFQDTASAYLAVQQGKAR 181
             P        +D  G++V +T+G+T++  +       ++ + F D A++  AV  G+A 
Sbjct: 135 GAPKSMTITGPADLAGKKVIATRGTTNDQEVTKILPAGTQIVRFDDDATSITAVVSGQA- 193

Query: 182 GMVANTMTTTKFVKESKTKGKPMRMIEEPMLYQPIGIGMAKDNPALTAKINEILRKLDAD 241
            + A      K + E K   K M   +  M    + IGM K+ P L AK++E ++     
Sbjct: 194 DIFATAPPLLKTINE-KNPAKQMEP-KFTMKVNMLAIGMRKNEPRLKAKLDEFVKAQLKS 251

Query: 242 GEINTIWNKWLGPDTEYKMTR 262
           GE+NTI+ K+ G D    +TR
Sbjct: 252 GELNTIYKKFHGADLPADVTR 272