Pairwise Alignments

Query, 254 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 260 a.a., L-lysine and D-lysine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

 Score =  277 bits (708), Expect = 2e-79
 Identities = 141/242 (58%), Positives = 179/242 (73%), Gaps = 2/242 (0%)

Query: 13  IRISNVCKSYGDYQVLKNIDAEVARGEVVVICGPSGSGKSTLIRTVNRLEEINSGSITLD 72
           IRI  + K YG + VL++ID +V  GE +V+CGPSGSGKSTLIR +NRLE    GSI +D
Sbjct: 21  IRIEGLNKHYGAFHVLRDIDLQVREGERIVLCGPSGSGKSTLIRCINRLEVAQQGSIQVD 80

Query: 73  GRDIHAATRTRELNLLRSRIGFVFQSFNLFPHLSVVENVTISPIRVKGVSPDIAQQKALA 132
           G D+  A  TRE   +RS IG VFQ FNLFPH+SV++N  ++P  V+G+S   A+++A  
Sbjct: 81  GIDL--AATTREAAQVRSDIGMVFQHFNLFPHMSVLDNCLLAPTSVRGLSRKDAEERARM 138

Query: 133 LLERVGLAEKAGAYPGQLSGGQQQRVAIARALAMEPPVMLFDEPTSALDPEMVGEVLAVM 192
            L +VG+  +A  YP QLSGGQQQRVAIARAL M+P +MLFDEPTSALDPEMV EVL V+
Sbjct: 139 YLSKVGIESQAHKYPSQLSGGQQQRVAIARALCMKPRIMLFDEPTSALDPEMVAEVLDVL 198

Query: 193 KGLAAEGMTMLCVTHEMGFAREVADRIWFIDAGEILERATPEEFFKTPRHPRAQRFLADL 252
             LA  GMTMLCVTHEMGFAR+VA+R+ F++ G+I+E + P+ FF  PR  RA+ FLA +
Sbjct: 199 VQLAGTGMTMLCVTHEMGFARQVAERVLFLEGGQIIEDSPPQVFFNQPRTERAKAFLAQI 258

Query: 253 RH 254
            H
Sbjct: 259 LH 260