Pairwise Alignments

Query, 252 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  109 bits (273), Expect = 6e-29
 Identities = 75/227 (33%), Positives = 126/227 (55%), Gaps = 13/227 (5%)

Query: 3   GDIVAILHDYWLLLLIGQYPNGPL-GGLANTLILSALAIALAFPVSILMALARLSTWRVL 61
           GD+V +   +W L        GPL  GL  TL LS ++  L   + +   L RLS+   L
Sbjct: 103 GDVVGVTR-HWAL--------GPLMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTL 153

Query: 62  RLPVTALVYVTRGVPLLMLILWTYFLIPLWTGADVPSFAIMLATLVVYQGAFLSEVVRAG 121
           R   T  V + RG PLL+ I   YF I   T  ++      +A L ++ GA+++E+VRAG
Sbjct: 154 RDLSTIYVELVRGTPLLVQIFIFYFFIG--TVLNLSREFAGIAALSLFTGAYVAEIVRAG 211

Query: 122 IVALGVGQMDAAKALGHSYGSAMRFIILPQALYNMIPSMISTFVATIKDTTLGYVINVPD 181
           + ++  GQ +AA++LG S   +MR ++LPQA   ++P +   F++ +KDT+L  VI + +
Sbjct: 212 VQSITRGQNEAARSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITE 271

Query: 182 LTFAASQVNNQLLTQPFQVFLILAVVYYALCWSLTYLANAVERRIAR 228
           L  +  +V     + PF++   +A +Y  +   L+ +A+ +ERR+A+
Sbjct: 272 LLKSGREVITTSFS-PFEILFCVAGLYLLINLPLSKMASRLERRLAQ 317