Pairwise Alignments

Query, 235 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 6e-28
 Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 12/210 (5%)

Query: 19  LLHGIEMTFIIFIGSWSLAMSLALILLCIRFSPSRFGDRLVAAYVSYHRNVPTLVQLMLW 78
           L  G+  T  I + S +L + + L     R S +     L   YV   R  P LVQ+ ++
Sbjct: 118 LAWGLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIF 177

Query: 79  YFGIFTLLPSGLTGWLTEHNAEAIFA-VVGLGLCQAAYFSEDLRSGLRSVSPGQMEAAKA 137
           YF I T+L           N    FA V  L L   AY +E +R+G++S++ GQ EAA++
Sbjct: 178 YFFIGTVL-----------NLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARS 226

Query: 138 LGHSYLSAMRFIIMPQGVRNALPPLINHSVSLFKNSSLALVIGASELTHAVKEIENLSFQ 197
           LG +   +MR +I+PQ  +  LPPL    +SL K++SL  VI  +ELT + +E    SF 
Sbjct: 227 LGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFS 286

Query: 198 TFEIYLVGTVLYLFFSLLIMGAGAYLSMRL 227
           TFEI+     LYL  +L +    + L  RL
Sbjct: 287 TFEIWFCVAGLYLLINLPLSHIASRLERRL 316