Pairwise Alignments

Query, 448 a.a., GntR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 469 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 3e-26
 Identities = 134/470 (28%), Positives = 196/470 (41%), Gaps = 61/470 (12%)

Query: 27  ADDIIE----GRLTGGARLPAHRDLAWKLGVGLGTVTKAYAVLERRGLTRSVKGRGTFV- 81
           ADDI E    G L  G R+P+ R  +   GV   TV +AY +LERRGL R+    G FV 
Sbjct: 8   ADDIAELIRSGVLGPGQRVPSVRYASQTHGVSPSTVFQAYYLLERRGLIRARPRSGYFVN 67

Query: 82  -----------ALQEAHNDRQIDLSSNA--------------------PPATLNARILAK 110
                      ALQ       +D+S+                       P     + L++
Sbjct: 68  AHVPRQFSEPQALQPVSESTDVDVSALVFSILDSIKDPNTIAFGSAFPSPELFPLQRLSR 127

Query: 111 TLTGIARKIDADHFNLYAPPVGHVEHRRVLARWLATQALSVDPSHLVLTSGARQALSLAF 170
           +L   +R +D         P G+ + RR +A       L +    L++T+GA +AL+L  
Sbjct: 128 SLASASRSMDPRMVVTDLSP-GNPQLRRQIALRYMVGGLMLPMEELLITNGALEALNLCL 186

Query: 171 DLTCGKDGLLLTERITYPGALALLRRKGCRVRGVEIDA---EGMVPEALAEALAGMKPGG 227
                   L+  E   +   L +L R   +++ VEI     EGM    LA+ L  M P  
Sbjct: 187 QAVTQPGDLVAIEAPAFYACLQVLER--LKLKAVEIPVHPREGMDLGVLAQTLE-MHP-- 241

Query: 228 VRAIYLTPTLHNPTTATMGMARRHAIVDICRRAGAWIIEDGVYAA---SDPGFSPLAAL- 283
           V+A++      NP  A+M  A++ A+V++  R    +IED VYA    S     P  A  
Sbjct: 242 VKAVWCMTNFQNPVGASMPEAKKQAMVELLARHQVPLIEDDVYAELYYSQQAPKPAKAFD 301

Query: 284 APDISFHVNGLSKSLGPGLQIGVLALPAGQ-KDAAENFLQDAPMAPSALSCAVVEDWLTT 342
              +  H    +KSL PG +IG +A  AG+     E       +  S  + A + D+L  
Sbjct: 302 TQGLVMHCGSFAKSLAPGYRIGWVA--AGRFAQKIERLKLMTSLCASMPAQAAIADYLQH 359

Query: 343 DVISSIQRDLRH--EARRRSSLAVSL--LGASELVSHPD-AYNVW--LPMQRAASKDFVS 395
                  R LR+  E ++ + LA       A   VS P   Y +W  LP Q  A K F  
Sbjct: 360 GGYDRHLRKLRYALEGQQANMLAAIARHFPAQTRVSQPSGGYFLWLELPEQMDALKLF-H 418

Query: 396 AAAASGIRLTAPDSMMADTEDQASGIRFCLGGPSFDDLTGALTVLAGLLR 445
            A A GI + AP  + + T    + IR   G P  D    A+  L  ++R
Sbjct: 419 MALAQGISI-APGPIFSPTRRFGNCIRLNYGSPWHDGAEQAMETLGRIIR 467