Pairwise Alignments

Query, 365 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 396 a.a., aconitate isomerase from Pseudomonas putida KT2440

 Score =  189 bits (480), Expect = 1e-52
 Identities = 144/384 (37%), Positives = 189/384 (49%), Gaps = 43/384 (11%)

Query: 10  LKIPCVLMRGGTSRGPFFLASDLPRDQAE-----RDAALLSIMGSGHPL--QIDGIGGGN 62
           +KIP   +RGGTS+G FF   DLP +QA+     RDA LL ++GS  P   QIDG+GG  
Sbjct: 7   IKIPATYIRGGTSKGVFFRLQDLP-EQAQIPGPARDALLLRVIGSPDPYGKQIDGMGGAT 65

Query: 63  PVTSKVAIIGPSTVKGADIDYLFAQVRTDRQYVDYSPNCGNMLAAVGPFAIEAGLVE--- 119
             TSK  I+  S     D+DYLF QV  D+ +VD+S NCGN+ AAVG FAI +GLV+   
Sbjct: 66  SSTSKTVILSQSIKPEHDVDYLFGQVSIDKAFVDWSGNCGNLSAAVGSFAISSGLVDPAR 125

Query: 120 -AHGNDTIVRIHNVNTSKLIEAKVPTRGREVIYLGDASIDGVPGLAAPIALTFMDAAGAK 178
                   VRI   N  K I A VP    EV   GD  +DGV   AA + L F+D A  +
Sbjct: 126 VPRNGIATVRIWQANIGKTIIAHVPITEGEVQETGDFELDGVTFPAAEVQLEFLDPAADE 185

Query: 179 T---GRLLPTGKAVDMID-----GLEVTAIDCAIPMVLMRAADLGLTGYEDPQALTANSD 230
               G + PTG  VD ++       + T I+  IP + + AAD+G TG E   A+  +  
Sbjct: 186 DGGGGAMFPTGNLVDDLEVPGVGTFKATLINAGIPTIFVNAADIGYTGTELQDAINGDPQ 245

Query: 231 LIERMTRIRIQAGKLMGMGDVTDMV-----IPKPVLVAP-----ARRGGT-------LSV 273
            + R   IR      MG+ D  D        PK   VAP     A  G         L V
Sbjct: 246 ALLRFETIRAYGAVRMGLIDNVDQAAGRQHTPKVAFVAPPSTYTASSGKAVPAGEIDLLV 305

Query: 274 RYFMPNECHPALATTGAVGIATAAVTEGSVAYDLAGRLSVPTQISIEHPAGRLDVQLEMR 333
           R     + H A+  T AV I TAA   G++  +LA      + +   HP+G L V  E R
Sbjct: 306 RALSMGKLHHAMMGTAAVAIGTAAAIPGTLV-NLAAGGGERSAVRFGHPSGTLRVGAEAR 364

Query: 334 ----EGAITAGLV-RTARRLFEGF 352
               E  +T  ++ R+AR L EG+
Sbjct: 365 QVNGEWTVTKAIMSRSARVLMEGW 388