Pairwise Alignments

Query, 365 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 359 a.a., putative isomerase from Pseudomonas putida KT2440

 Score =  394 bits (1013), Expect = e-114
 Identities = 206/350 (58%), Positives = 255/350 (72%), Gaps = 6/350 (1%)

Query: 11  KIPCVLMRGGTSRGPFFLASDLPRDQAERDAALLSIMGSGHPLQIDGIGGGNPVTSKVAI 70
           +IPCVLMRGGTS+GPFF A DLP +  ERD  L+++MGSGH L+IDGIGGG+P TSKVAI
Sbjct: 3   RIPCVLMRGGTSKGPFFHAWDLPANVVERDELLINLMGSGHELEIDGIGGGSPQTSKVAI 62

Query: 71  IGPSTVKGADIDYLFAQVRTDRQYVDYSPNCGNMLAAVGPFAIEAGLVEAHGNDTIVRIH 130
           I PS    AD+DYLF QV   ++ VD +PNCGNML AVGPFAIE GLV+     T+VRI 
Sbjct: 63  ISPSLHADADVDYLFVQVMVAQRRVDTAPNCGNMLCAVGPFAIEQGLVKGQEGKTLVRIR 122

Query: 131 NVNTSKLIEAKVPTRGREVIYLGDASIDGVPGLAAPIALTFMDAAGAKTGRLLPTGKAVD 190
           N+NT   + + V T G  V Y G  +IDGVPG AAP+ LTF+DA G+KTG+L PTGKA D
Sbjct: 123 NLNTGTFVNSLVETPGGIVRYEGRTAIDGVPGTAAPVHLTFLDAVGSKTGKLFPTGKAQD 182

Query: 191 MIDGLEVTAIDCAIPMVLMRAADLGLTGYEDPQALTANSDLIERMTRIRIQAGKLMGMGD 250
           +IDG+ VT ID A+PM+++ A+ LG++G E P  L ANS L+ER+  +R++AGK MG+GD
Sbjct: 183 VIDGVPVTCIDMAMPMMVVEASQLGVSGSETPAQLDANSALLERLEALRLKAGKAMGLGD 242

Query: 251 VTDMVIPKPVLVAPARRGGTLSVRYFMPNECHPALATTGAVGIATAAVTEGSVAYDLAGR 310
           V+ MVIPKPVLV+  R  GTL VRYFMP+ CH ALA TGAVG+ATA V+ G+V  DL G 
Sbjct: 243 VSGMVIPKPVLVSKPRYDGTLQVRYFMPHNCHRALAITGAVGLATACVSPGTVIADLLGE 302

Query: 311 -LSVPTQISIEHPAGRLDVQLEMREGA----ITAGLVRTARRLFEGFAFA 355
                 Q+ +EHP+G +DV L  R GA    I A +VRTARRLF GF +A
Sbjct: 303 GAQQLAQVRLEHPSGGIDVAL-TRSGAEGQTIQASVVRTARRLFSGFVYA 351