Pairwise Alignments

Query, 309 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 352 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 60/251 (23%), Positives = 99/251 (39%), Gaps = 17/251 (6%)

Query: 7   NLNNL---PFPVAASLGFYKDEGLDVTTENFAQGGSKVLQALVAGSTDVAVGFYDHTIQM 63
           NLN +   P  +A   GF+    LDV   NF      +L+A+  G  D  VG     ++ 
Sbjct: 64  NLNAVCLAPVVIAHGQGFFTKHNLDVELVNFGNSTEVLLEAIATGKADAGVGMALRWLKA 123

Query: 64  QSQNKHVVGFVQLARNSGLVLAGTNDTDFDPAKPETIKGKKVGITSPGSSSDFFIRYYMK 123
             Q   V      A   G  L   +  +   AK E +KGK +G+T   S    F    +K
Sbjct: 124 LEQGFDV---KLTAGTHGGCLRLLSAVNGAVAKLEDLKGKAIGVTDMASPDRNFFSILLK 180

Query: 124 QHNLSDNDISIIGVGSGAAAVAALQQGKIDLLVNYDPAATIVVERGLGKILIDARSDQGA 183
           +H +         +        AL++G++  +   DP    +++ G+ + L     ++ A
Sbjct: 181 KHGVDPVRDVEWRLYPADLLGTALERGEVQAVSGSDPFMYRLIKSGVARELSTNLVEEYA 240

Query: 184 KDVYGGIYPTSVLYATQDYINANPEVIQKVTNATVRALHWMKQHSAEEIVAKLPDDFVSG 243
                      V+  T   +  +  V+  +T A + A  +  QH  E  VAK    F + 
Sbjct: 241 N------LSCCVVGVTGKLVREDKRVVVALTQAILEAHDYSVQHPEE--VAK---GFQAH 289

Query: 244 DKQTYIKAVEA 254
              T I+ V+A
Sbjct: 290 ALNTSIEEVQA 300