Pairwise Alignments

Query, 309 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 43.5 bits (101), Expect = 7e-09
 Identities = 54/202 (26%), Positives = 81/202 (40%), Gaps = 14/202 (6%)

Query: 25  EGLDVTTENFAQGGSKVLQALVAGSTDVAVGFYDHT-IQMQSQNKHVVGFVQLARNSGLV 83
           EG+ VT   F  G   +L+AL  G+ D++    D   +  Q+    +  F + A  S   
Sbjct: 56  EGIRVTWHEFPSG-LPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAP-SPTA 113

Query: 84  LAGTNDTDFDPAKPETIKGKKVGITSPGSSSDFFIRYYMKQHNLSDNDISIIGVGSGAAA 143
            A     D        +KGK+V +T    S    I+   K   L+  DI+   +   A  
Sbjct: 114 QAILVPADSPLKTLADLKGKRVAVTKAAGSHYLLIQALAKA-GLTFKDITPAYL-IPADG 171

Query: 144 VAALQQGKIDLLVNYDPAATIVVERGLGKILIDARSDQGAKDVYGGIYPTSVLYATQDYI 203
            AA +  K+D  V +DP       +   +IL+D       +  Y          A  DY 
Sbjct: 172 RAAFENHKVDAWVTWDPYVASAQRQQNARILVDGSELASYQRYY---------LAGSDYA 222

Query: 204 NANPEVIQKVTNATVRALHWMK 225
            A+PEV+Q+V  A   A  W K
Sbjct: 223 KAHPEVLQQVYLALREAGAWTK 244