Pairwise Alignments

Query, 309 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 330 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) from Agrobacterium fabrum C58

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 78/306 (25%), Positives = 119/306 (38%), Gaps = 38/306 (12%)

Query: 15  VAASLGFYKDEGLDVTTENFAQGGSKV--LQALVAGSTDVAVGFYDHTIQMQSQNKHVVG 72
           VA   GFY+ EGLDV   +   GG  +   Q L  G  DV V +    +  + +   +V 
Sbjct: 44  VAKDKGFYEAEGLDV---DIKPGGPDIAPAQVLAGGGADVIVDWMPSALATREKGVPLVN 100

Query: 73  FVQLARNSGLVLAGTNDTDFDPAKPETIKGKKVGITSPGSSSDFFIRYYMKQHNLSDNDI 132
             Q  ++SG++L    +T     KPE  KGK +G+   G+   F          LS    
Sbjct: 101 IAQPFKSSGMMLTCLKETGI--TKPEDFKGKTLGVWFFGNEYPF----------LSWMAH 148

Query: 133 SIIGVGSGAAAVAALQQG-KIDLLVNYDPAATIVVERGLGKILIDARSDQGAK------- 184
             I    GA  V  L+QG  +D L+    A    +       +IDA    G K       
Sbjct: 149 LKIPTTGGADGVTVLKQGFNVDPLLQKQAACISTMTYNEYWQVIDA----GIKPEELVTF 204

Query: 185 --DVYGGIYPTSVLYATQDYINANP--EVIQKVTNATVRALHWMKQHSAEEIVAKLPDDF 240
             +  G       LY  +D +      E + K   A+++   W ++H  +     L +D 
Sbjct: 205 KYEAEGVATLEDGLYVLEDKLKDAKFREDLVKFVRASMKGWKWAEEHPDDAAGIVLENDA 264

Query: 241 VSGDKQTYIKAV--EAAKAIFSEDGKFEPADLE-TPLAVLKSFNDAVAKATIDLNTTYTN 297
                + + K +  E AK      G  + AD E T   +L   +D V   T +    YT 
Sbjct: 265 SGAQTEKHQKRMMGEVAKLTAGSKGALDKADYERTVKTLLGGGSDPV--ITKEPAGAYTT 322

Query: 298 KFVEAA 303
           +  +AA
Sbjct: 323 EITDAA 328