Pairwise Alignments

Query, 273 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 270 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  296 bits (757), Expect = 4e-85
 Identities = 144/251 (57%), Positives = 182/251 (72%), Gaps = 1/251 (0%)

Query: 20  VAIDDVTMAFGSFVAVQNVNLRVGDGEFLSIVGPTGCGKSTILNAIAGLLKPAQGKVSID 79
           +A    + A   FVAV  VNL V DGEF++IVGPTGCGKST+LNA AGLLKPA G V+I 
Sbjct: 14  IAFPGASRAASPFVAVHGVNLDVADGEFVAIVGPTGCGKSTLLNATAGLLKPASGTVTIH 73

Query: 80  GTAVQGVQNTIGYLFQQDALLPWKTAFQNVELGLMFRGVAEDERRAKVTAWLEKVGLKGF 139
           GT + G+    GYLFQ +AL PWKTA  NV +GL   G   DE RA+   WL +VGL  F
Sbjct: 74  GTPLAGLNRAAGYLFQAEALFPWKTALDNVAIGLEVAGTDTDEARARARKWLARVGLAAF 133

Query: 140 GDRFPHQLSGGQRKRVQMAQALITEPKVILMDEPFSALDIHTRHLMQNELLRLWQEDRRA 199
            DR+PHQLSGGQRKRV +AQ LI +PK++LMDEPF  LD  TR +M N LL LW +DR+A
Sbjct: 134 ADRYPHQLSGGQRKRVGLAQVLIRDPKILLMDEPFGPLDAQTRQIMGNLLLDLWSQDRKA 193

Query: 200 VVMITHDLEEAIALGDRVVVLAAGPKSRVIESFPVDLERPRNVAEIKLDPKFMTLYRDIW 259
           V+ +THDLEEAI+L DRVV++ AGP SR+I  + V + RPR++ +++L+P F  L+R+IW
Sbjct: 194 VMFVTHDLEEAISLADRVVIMGAGPASRIIGQWRVPIPRPRDI-DVRLEPAFHHLHREIW 252

Query: 260 ASLRGEVEKSY 270
           A+L+ EV K Y
Sbjct: 253 AALKDEVVKGY 263