Pairwise Alignments

Query, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  154 bits (389), Expect = 8e-42
 Identities = 132/528 (25%), Positives = 235/528 (44%), Gaps = 32/528 (6%)

Query: 5   TTVRTTLLLGSLLLGASSALA--ETVLHRGNSGEPQTLDQAQTSINIEAFILKDLFEGLT 62
           TTV + +   SLL  A+   A  +  L   + G P   D AQ +   +    + L+  L 
Sbjct: 4   TTVLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDAAEPLYNRLV 63

Query: 63  IYDAAGK-IVPGTAESWTLSDDGTVYTFKLRADAKWSDGTPV------TAGDFVFSYQRV 115
            ++     +VP  A  W +S DG  YTF LR   K+             A D +F++ R+
Sbjct: 64  EFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRM 123

Query: 116 EDPKTAAKYANIL-YPIKNAEKINKGETPVDQLGVKAVDDKTLEITLERSTPFFLELLAH 174
            DP    + A    +P  N   +NK    V++      D  T+ +TL      F++ +A 
Sbjct: 124 LDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEK-----TDPHTVVMTLNTVDAAFIQNIAM 178

Query: 175 QTALPISKASYEKNGTNFVKPGVM----VSNGAYKLEAHVPNDSLTVVKNTDFWDASNTK 230
             A  +S A Y +      KP  +    +  G +  + +  +  +  V N  +WD S  K
Sbjct: 179 SFAAILS-AEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVK 237

Query: 231 IDKVIFYPIDDQAASVRRFEAKEMDLAYNFSADQIDRLRKSYGEQVHVSPTLATYYYTFD 290
           +D++IF    D +  V++ +A E  +  +     +D L+     ++   P     Y  ++
Sbjct: 238 LDQLIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYN 297

Query: 291 TREAPYDDVRVRQALSMAVDRDFLAKEIYSGSQVPAYSMVPPGMDSYGEPAKADFATLSQ 350
            R  P+D + VRQAL MAV++  +   +Y G+   A + +PP   SY +  K        
Sbjct: 298 VRHKPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIK------DA 351

Query: 351 LDREDEALKLMKDAGYGEGGKPL--SIEIRYNTNPNHERVATAIADMWKNTFGAKVSLVN 408
               ++A +L+K AG  EG +    ++ ++   NPN + +A  +   W    G KV +V+
Sbjct: 352 AYNPEKAKELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAK-IGLKVKIVS 410

Query: 409 LDVASHYGYLQEGGKFNVARAGWVADYADAENFLALSVSSNKT--FNYSKFNNAEYDSLM 466
            +    Y    + G+ +V+  GW  D  D +N+L    S +     NYS + +  YD L+
Sbjct: 411 YE-WGEYIKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLI 469

Query: 467 QKSYNEKDPAARSKLLHEAETILMKEQPVAPLLTQADLWLVSNRVKGW 514
           +++    D   R+ L  +A+ +L ++ P+ P+        +S +V+G+
Sbjct: 470 KQAKVVTDREQRTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGF 517