Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 334 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

 Score =  204 bits (520), Expect = 2e-57
 Identities = 124/336 (36%), Positives = 186/336 (55%), Gaps = 34/336 (10%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFNL---ERPLPPQTMENLMRTYHLDE 57
           M+ F+L R++  VPT   +  ++FFL+R  PG P      ER + P     L   Y  D+
Sbjct: 1   MLRFLLTRVSLLVPTFIGMTLLAFFLIRMVPGDPIETMAGERGIDPARHAQLRTAYGFDK 60

Query: 58  PLWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGT 117
           P+  QY IY+   + GD G S I +++   + +    P ++ELG  A+L AL+ G+ AG 
Sbjct: 61  PVIVQYGIYIGRVLHGDLGKSLITQESVANEFLAL-FPATVELGVCAILFALLLGLPAGI 119

Query: 118 LAALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGS------------ 165
           +AA+R+NS FD  +M+ S  G ++P F    +L L F+V LG  P               
Sbjct: 120 IAAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYFVEPRT 179

Query: 166 ----------------WGDGSLRYLILPMIALALPQLAVIARLTRGAMIEALRMDHIRTA 209
                           W   +L +L+LP I L    LAVIAR+TR AM+E L  D+IRTA
Sbjct: 180 GFLLVDALRAGEVDAFWS--ALHHLVLPAIVLGTVPLAVIARMTRSAMLEVLGEDYIRTA 237

Query: 210 KAYGLPARSVVVLHAMRAAMLPVVSYLAPCAAALLTGSAVIETIFTIPGVGRYFVLGAIN 269
           +A GL    VV LHA+R A++PVV+ +      L TG+ + ETIF+ PGVG++ +     
Sbjct: 238 RAKGLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGR 297

Query: 270 RDYTLVMGTVVLVAIFVIVFNLLVDILYGLLDPRVR 305
           RDY ++ G ++L+   V++ NLLVD+ YG+++PR+R
Sbjct: 298 RDYPVLQGGMLLLGGIVMLVNLLVDVTYGIINPRIR 333