Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Dickeya dianthicola ME23

 Score =  208 bits (529), Expect = 2e-58
 Identities = 123/338 (36%), Positives = 187/338 (55%), Gaps = 33/338 (9%)

Query: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFNL---ERPLPPQTMENLMRTYHLDE 57
           M+ FILRRL   +PT   +  ++F  +   PG P  +   ER + P+    LM    LD+
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERGISPERHAQLMAELGLDK 60

Query: 58  PLWRQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGT 117
           PLW QYL Y+   + GD G S   +     + + +    +LELG  A++ A++ G+  G 
Sbjct: 61  PLWDQYLHYINGVLHGDLGMSLKSRIPVWDEFVPR-FKATLELGVCAMIFAVIVGIPVGV 119

Query: 118 LAALRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGS------------ 165
           LAA+++ S FD + +SI+  G ++P F    +L ++ +V L L P               
Sbjct: 120 LAAVKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDAL 179

Query: 166 ------------WG-DGSLR----YLILPMIALALPQLAVIARLTRGAMIEALRMDHIRT 208
                       WG DG  +    +++LP + L    LAVI R+TR AM+E L  D+IRT
Sbjct: 180 PLSGFMLIDTLIWGADGDFKDAVMHMVLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIRT 239

Query: 209 AKAYGLPARSVVVLHAMRAAMLPVVSYLAPCAAALLTGSAVIETIFTIPGVGRYFVLGAI 268
           A+A GL    V+V+HA+R AMLPVV+ +      +L G+ + ETIF+ PG+GR+ +    
Sbjct: 240 ARAKGLSRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDALQ 299

Query: 269 NRDYTLVMGTVVLVAIFVIVFNLLVDILYGLLDPRVRH 306
            RDY +V   V+LVA  +I+ NLLVD+LYG+++PR+RH
Sbjct: 300 RRDYPVVQSGVLLVATMIILVNLLVDLLYGVVNPRIRH 337