Pairwise Alignments
Query, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58
Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440
Score = 536 bits (1380), Expect = e-157
Identities = 284/506 (56%), Positives = 377/506 (74%), Gaps = 5/506 (0%)
Query: 4 VKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIE--GSAKYRGHELIGLPVN 61
V G+ D+++GETLA+VGESGSGKS T I+ LL GS +Y G +L+
Sbjct: 26 VDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLLQQSEK 85
Query: 62 ELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGIP 121
L IRG +I MIFQEPMTSL+PL+ I QI E ++ H+G + ++A AR LELL +VGIP
Sbjct: 86 TLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDMVGIP 145
Query: 122 EPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQQ 181
EP +R+ + PHELSGGQRQRVMIAMALANEP++LIADEPTTALDVT+Q +IL+LLK LQ
Sbjct: 146 EPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQA 205
Query: 182 RFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEPSGH 241
R GMA++LI+HDL +VR A+RV VM+RG+IVE +F PQ YT+ML++AEPSG
Sbjct: 206 RMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHYTQMLINAEPSG- 264
Query: 242 KPAVGSEAPVVLSGKNVTIDYKIPGGFLSKS-SKFRAVDSVNVDLHQGQTIGIVGESGSG 300
PA +L ++ + + I GFL ++ +AVD VN L QGQT+GIVGESGSG
Sbjct: 265 LPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSG 324
Query: 301 KSTLGRALLRLIVSEGRIFFGKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPRQTVGEI 360
KSTLG A+LRLI S+G I F + GL++KA+RPLRR +Q+VFQDP+GSLSPR V +I
Sbjct: 325 KSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADI 384
Query: 361 ITEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPHEFSGGQRQRIAIARAIILKP 420
+ EGL +H ++ E++ I AL+EVGLDP R+RYPHEFSGGQRQRIAIARA++LKP
Sbjct: 385 VGEGLRIHRIGTAQ-EQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKP 443
Query: 421 EVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKI 480
+++LDEPTSALDR+VQ QV++LLR+LQ+ + L+Y+FISHDL+V+KA+S ++V+++G +
Sbjct: 444 ALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHV 503
Query: 481 VEEGETDAIFSRPTAEYTKTLIKSAF 506
VE+G+ AIF P YT+ L+++AF
Sbjct: 504 VEQGDAQAIFHAPQHPYTRQLLEAAF 529
Score = 176 bits (447), Expect = 1e-48
Identities = 92/236 (38%), Positives = 151/236 (63%), Gaps = 7/236 (2%)
Query: 1 MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYRGHELIGLPV 60
+ AV G++ + QG+TL +VGESGSGKS + I+ L++S +G ++ G L GL
Sbjct: 299 VKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISS----QGGIRFHGQNLEGLNQ 354
Query: 61 NELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGI 120
+ +R ++ ++FQ+P SL P + + E + HR G+ ++ A ++ L+ VG+
Sbjct: 355 KAVRPLR-REMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGL 413
Query: 121 PEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQ 180
+P R YPHE SGGQRQR+ IA AL +P +++ DEPT+ALD T+Q Q+++LL++LQ
Sbjct: 414 -DPRTR-HRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQ 471
Query: 181 QRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDA 236
Q++ + + I+HDL VV+ ++++ V++ G +VE G + IF PQ YT+ LL+A
Sbjct: 472 QKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
Score = 164 bits (415), Expect = 7e-45
Identities = 95/247 (38%), Positives = 151/247 (61%), Gaps = 12/247 (4%)
Query: 268 FLSKSSKFRAVDSVNVDLHQGQTIGIVGESGSGKSTLGRALLRLIV------SEGRIFFG 321
F++ R VD V+ D+ +G+T+ +VGESGSGKS ++LRL+ G I +
Sbjct: 16 FVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYE 75
Query: 322 KTEITGLDRKAMRPLR-RHLQLVFQDPYGSLSPRQTVGEIITEGLFVHEQQLSRAERDKR 380
++ K ++ +R + ++FQ+P SL+P + + I E L +H + L+ E R
Sbjct: 76 GKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLH-KGLTGKEATAR 134
Query: 381 AIEALKEVGLDPAARNR---YPHEFSGGQRQRIAIARAIILKPEVVILDEPTSALDRSVQ 437
+E L VG+ P R R PHE SGGQRQR+ IA A+ +PE++I DEPT+ALD +VQ
Sbjct: 135 TLELLDMVGI-PEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQ 193
Query: 438 GQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKIVEEGETDAIFSRPTAEY 497
++++LL++LQ G++ + ISHDL++++ I+ V VM+ G+IVE+ E +FS P Y
Sbjct: 194 LKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHY 253
Query: 498 TKTLIKS 504
T+ LI +
Sbjct: 254 TQMLINA 260