Pairwise Alignments

Query, 419 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 440 a.a., ABC transporter for D-Mannitol and D-Sorbitol, periplasmic substrate-binding protein (from data) from Pseudomonas simiae WCS417

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 20/239 (8%)

Query: 30  MAIWSANEAHLALFNEIADEFEASHPGVKITYDSLAYEGYATTLTTQIA-GGNPPDLAWL 88
           + I + N + +    +++  FEA HP +K+ +  L        LTT IA  G   D+  +
Sbjct: 30  LTIATVNNSDMIRMQKLSKTFEAEHPEIKLNWVVLEENVLRQRLTTDIATQGGQFDVLTI 89

Query: 89  FDTTAPDFMAAGALYPLTETFANTQGYDMGDFPPATLAAWSYEGTQYLYPFSTSPFGVFV 148
               A  + A G L P+ +  A+   YD+ D  P+     S +G+ Y  PF       + 
Sbjct: 90  GMYEAALWGAKGWLEPMKDLPAS---YDLDDVFPSVRDGLSVKGSLYALPFYAESSITYY 146

Query: 149 NNDMIRAAGAKTPAEMIAAGDWNWDNAIATAAKVAATGKQ--GLIIRDFEYKAW-ENLAE 205
             D+ + AG   P          W      A+K+    K+  GL +R      W EN+A 
Sbjct: 147 RTDLFKDAGLTMPEHP------TWTQIGEFASKLTDKTKEQYGLCLRG--KAGWGENMAL 198

Query: 206 VYTGWNAY--PWSKDTKSCAFASPEMVDAMRFIHDAIFVKKAMPGPGVSADFFAGDAAM 262
           + T  N Y   W  +     F  PE  DA+ F  D   +KK+ P PG S++ F  + A+
Sbjct: 199 ITTLANGYGARWFDEKWQPEFNGPEWKDALNFYVDN--MKKSGP-PGASSNGFNENLAL 254