Pairwise Alignments

Query, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 294 a.a., ABC transporter, membrane spanning protein (maltose) from Agrobacterium fabrum C58

 Score =  130 bits (328), Expect = 3e-35
 Identities = 85/288 (29%), Positives = 148/288 (51%), Gaps = 6/288 (2%)

Query: 20  ARRDAAT-GYLFIAPQLIGIVVFVLVPLVLVFWYSLHEWNVLAGSFRFTGIANYQKLLSD 78
           A+R A    +  + P L  I + V  PLV  F  S  + + L     + G  NY+K+ + 
Sbjct: 3   AKRSAVIFAWFLLLPALFYITLIVAYPLVDTFILSFTDAS-LKKVTNWVGFINYEKIFN- 60

Query: 79  PAIGEVLAVTAVFSAGLALLNMSLALGLALLLNQQLAFMTMFRTLFFSPVVVSLVAWTIV 138
               +V+  T V++     + M +    A+LLN  +    +FR L   P +V +     +
Sbjct: 61  ATFADVITRTFVWTFFSVSIKMIIGTFGAVLLNSAVPGRALFRILTMPPWIVPMAIGIFM 120

Query: 139 WSFLLQNNGG-INGLLQMIG-VEGP-NWLRHPTTAMISVIVVQALKNVGLNMILFLAALQ 195
           W ++     G I+G+LQ +G V+GP  +L +  TA  + IV      V +  +  LAA+Q
Sbjct: 121 WGWMYNGQFGMISGVLQNLGLVDGPVAFLAYGRTAFWATIVTDVWIGVPMVTLYLLAAIQ 180

Query: 196 GVPRELFEAARVDGVPRFKQFYRITLPMISPTILLASIVTIVGALQVFAQIMILTQGGPG 255
            +P++L+EAA  DG  R  +F RITLP++ P ++  S+++++     F  I ILT+GGP 
Sbjct: 181 SIPQDLYEAAWTDGASRSYRFRRITLPLMLPAMITMSVLSLISTFNSFDIIWILTRGGPN 240

Query: 256 FSTTVLVYYLYQQAFQFYLFGYGSTLSIILLVIVGALTFIQWHLRRKF 303
             TT ++   Y+ A   Y +G G+  ++++ + +   TF  + + R+F
Sbjct: 241 GETTTMIIDTYKTAIGAYKYGEGAARAVLICIFLSIFTFFYFRITRRF 288