Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 272 a.a., carbohydrate ABC transporter permease from Serratia liquefaciens MT49

 Score =  182 bits (463), Expect = 5e-51
 Identities = 97/276 (35%), Positives = 159/276 (57%), Gaps = 4/276 (1%)

Query: 5   LSPRAQTLIYFILCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFR 64
           +S   +TL+Y  + +  +  V P  WM+ +S+K  ++    P  + P      +Y  + R
Sbjct: 1   MSISKRTLVYLFMVLAALASVVPFIWMLVTSLKTQAESIQIPLTLLPAHPSLQAYGKIMR 60

Query: 65  IQPFALQYWNSAYIAAIVTIGTMAVASMAGYAFARIRFPFANAIFMVVLVGLLIPSEVTL 124
             PFA  Y NS           M +A+MA Y F+R+ F   +A+F+V +  L++P +  L
Sbjct: 61  EIPFADFYLNSLLATFFTVTLQMVIATMAAYGFSRLHFRGRDAVFLVCISILMVPGQAFL 120

Query: 125 VPLFRMFLKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFK 184
           +P F +  K G++N+   L+L  IF   +++ATF++RQFF+++P E+EEAA +DG S F 
Sbjct: 121 IPQFLVVQKLGLVNSITGLVLPGIF---SIYATFLLRQFFLAVPKEMEEAALIDGYSYFA 177

Query: 185 IFWTIALPLARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQFTDAYGGPMW 244
           IFW I LPL RP + A  I   L SWN  + P++  ++ +K TLP  L   + +  G  +
Sbjct: 178 IFWRIMLPLIRPGIIACIIINGLWSWNNLMWPLIVNTTTEKLTLPVGLASLS-SRAGVEY 236

Query: 245 NIQLAAATMTAIPVLIVFIVAQKQFVEGLAHTGLKG 280
            + +A A M  IP+L++FI+ Q+ F++G+A  G+KG
Sbjct: 237 PLLMAGALMAVIPMLMLFILFQRYFIQGIASAGVKG 272