Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 280 a.a., Inner membrane ABC transporter permease protein YcjP from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  135 bits (341), Expect = 8e-37
 Identities = 86/276 (31%), Positives = 150/276 (54%), Gaps = 18/276 (6%)

Query: 14  YFILCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFR--IQPFALQ 71
           Y  L + L+  +FP + M+ +S K   +  +  P + P+ +    Y D+F   I PF   
Sbjct: 14  YCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDY 73

Query: 72  YWNSAYIAAIVTIGTMAVASMAGYAFARIRFP---FANAIFMVVLV--GLLIPSEVTLVP 126
           + NS  ++ + ++  + +  +  YA +R+RF      NA F  V +  G+L+     +VP
Sbjct: 74  FRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILL-----VVP 128

Query: 127 LFRMFLKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIF 186
           LF++    G+ +T   LI+  +       A F+++ +F ++P E+EEAA +DGL+R +I 
Sbjct: 129 LFKIITALGIYDTEMALIITMVTQTLPT-AVFMLKSYFDTIPDEIEEAAMMDGLNRLQII 187

Query: 187 WTIALPLARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQF--TDAYGGPMW 244
           + I +PLA   L +V ++ F+ +WN YL   +FLSS   FTLP  L     T  Y   +W
Sbjct: 188 FRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDY---IW 244

Query: 245 NIQLAAATMTAIPVLIVFIVAQKQFVEGLAHTGLKG 280
              +AA+ +TA+PV+I++ ++++    GL   G+KG
Sbjct: 245 GRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG 280