Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 280 a.a., Inner membrane ABC transporter permease protein YcjP from Escherichia coli ECRC98

 Score =  135 bits (341), Expect = 8e-37
 Identities = 85/273 (31%), Positives = 149/273 (54%), Gaps = 18/273 (6%)

Query: 17  LCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFR--IQPFALQYWN 74
           L + L+  +FP + M+ +S K   +  +  P + P+ +    Y D+F   I PF   + N
Sbjct: 17  LALFLIITLFPFFVMLMTSFKSAKEAISLHPTLLPQQWTLEHYVDIFNPVIFPFVDYFRN 76

Query: 75  SAYIAAIVTIGTMAVASMAGYAFARIRFP---FANAIFMVVLV--GLLIPSEVTLVPLFR 129
           S  ++ + ++  + +  +  YA +R+RF      NA F  V +  G+L+     +VPLF+
Sbjct: 77  SMVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILL-----VVPLFK 131

Query: 130 MFLKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIFWTI 189
           +    G+ +T   LI+  +       A F+++ +F ++P E+EEAA +DGL+R +I + I
Sbjct: 132 IITALGIYDTEMALIITMVTQTLPT-AVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRI 190

Query: 190 ALPLARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQF--TDAYGGPMWNIQ 247
            +PLA   L +V ++ F+ +WN YL   +FLSS   FTLP  L     T  Y   +W   
Sbjct: 191 TVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDY---IWGRM 247

Query: 248 LAAATMTAIPVLIVFIVAQKQFVEGLAHTGLKG 280
           +AA+ +TA+PV+I++ ++++    GL   G+KG
Sbjct: 248 MAASLVTALPVVIMYALSERFIKSGLTAGGVKG 280