Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 276 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 1e-38
 Identities = 81/263 (30%), Positives = 142/263 (53%), Gaps = 5/263 (1%)

Query: 13  IYFILCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFRIQPFALQY 72
           +Y  +   LV  +FP +W++ +++    +++  PP  WP    +  ++ V+  +P  L  
Sbjct: 11  LYATVIFTLVMVLFPVYWLLVTALSTTDELYRLPPTFWPDDPQWDIFARVWAAKPILLWL 70

Query: 73  WNSAYIAAIVTIG-TMAVASMAGYAFARIRFPFANAIFMVVLVGLLIPSEVTLVPLFRMF 131
           WNS  +AAI ++  +M V+  AGYA +R        + + VL   ++P+ + ++PLF +F
Sbjct: 71  WNS-MLAAIGSVALSMLVSVSAGYALSRYSMRGGATMGLFVLTAKMLPATLLVIPLFSIF 129

Query: 132 LKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIFWTIAL 191
             +G+I + W L+L         FAT++++ +F ++P ELE+AA VDG S       + L
Sbjct: 130 SSFGLIGSLWTLVLAH-STMIIPFATWMLKGYFDTIPKELEQAAMVDGCSPIGAMVRVVL 188

Query: 192 PLARPALAAVAIFTFLGSWNLYLEPIVFL-SSPDKFTLPQALTQFTDAYGGPMWNIQLAA 250
           P+A P LAA A++ F+ SW  Y     FL +SPD +T    +T     Y    WN   AA
Sbjct: 189 PIATPGLAATALYAFVLSWADYAYARTFLVNSPDNWTANLGITTMQGEY-VTYWNDISAA 247

Query: 251 ATMTAIPVLIVFIVAQKQFVEGL 273
           +   A+P++ +++  ++  V GL
Sbjct: 248 SVFIALPIIAIYLFLERYLVGGL 270