Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 275 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  135 bits (339), Expect = 1e-36
 Identities = 82/278 (29%), Positives = 144/278 (51%), Gaps = 7/278 (2%)

Query: 5   LSPRAQTLIYFILCV-LLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVF 63
           L+ R + +I  +L     + ++FP +W   +S++    + A    + P  F  S+Y    
Sbjct: 3   LTRRLENIILTVLTFSAALVWIFPLYWTFVTSIRSDENV-AGNTSLIPDEFRLSAYVSAI 61

Query: 64  RIQPFALQYWNSAYIAAIVTIGTMAVASMAGYAFARIRFPFANAIFMVVLVGLLIPSEVT 123
                   Y NS   AAIVT+  + ++ +  YA ++IRFP    ++ +VL   ++P++  
Sbjct: 62  FNTKLMNWYINSVGTAAIVTVSVLLISMLCAYALSQIRFPGRRLLYGIVLASFMVPAQTL 121

Query: 124 LVPLFRMFLKWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRF 183
           +V  F +     +INT W  I++P    P V   +  +QFF S+P E+ EA  +DG   +
Sbjct: 122 VVTQFILMKNLNLINT-WAGIILPQLITPIVIIVY--KQFFDSVPKEMREAVVLDGGGEY 178

Query: 184 KIFWTIALPLARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQFTDAYGGPM 243
            I + + LPL      A+AI TF+  WN +  P + ++S D  T+P  +TQ  D +G   
Sbjct: 179 TILFKVYLPLNWGITTAMAIVTFITVWNAFFWPFLVVTSEDMMTIPVGITQVNDTFGVAY 238

Query: 244 WNIQLAAATMTAIPVLIVFIVAQKQFVEG-LAHTGLKG 280
             + +A A + A+PV+I ++V Q++  E  +  +G+KG
Sbjct: 239 ARL-MAIAMLAALPVIIAYVVFQRRVTEAIMISSGVKG 275