Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 278 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  147 bits (370), Expect = 3e-40
 Identities = 87/268 (32%), Positives = 143/268 (53%), Gaps = 6/268 (2%)

Query: 13  IYFILCVLLVPFVFPTWWMVTSSVKPVSQIFAFPPDIWPRTFDFSSYSDVFRIQPFALQY 72
           ++F+  V++ P +    WM++ S+K      A+PP + P  F +S+Y  VF    F L +
Sbjct: 16  LFFVALVMISPVILFFIWMISLSLKYEIDNGAYPPILIPERFAWSNYVKVFEENSFFLYF 75

Query: 73  WNSAYIAAIVTIGTMAVASMAGYAFARIRFPFANAIFMVVLVGLLIPSEVTLVPLFRMFL 132
           WNS  +    TI  + +   AGY  AR++   A    +V+++  + P    L+PLF +F 
Sbjct: 76  WNSVLVTGAATILALVIGVPAGYGIARLK---AEKSAVVIMIARMTPGLSFLIPLFLLFQ 132

Query: 133 KWGMINTHWPLILVPIFGAPAVFATFIMRQFFISLPVELEEAAWVDGLSRFKIFWTIALP 192
              ++ T WP I++ +         +IM  +F + P ELEEAA +DG S +++F  +ALP
Sbjct: 133 WLNLLGTLWPQIIIHLV-VTVPIVVWIMIGYFETTPKELEEAASIDGASSWQVFRLVALP 191

Query: 193 LARPALAAVAIFTFLGSWNLYLEPIVFLSSPDKFTLPQALTQFTDAYGGPMWNIQLAAAT 252
           +A+P +    I   + SWN ++  IV L+S +  TLP A+     ++    W    AAA 
Sbjct: 192 IAKPGIVVSFILAVIFSWNNFVFGIV-LASRETRTLPVAVYNML-SFEQVSWGPLAAAAL 249

Query: 253 MTAIPVLIVFIVAQKQFVEGLAHTGLKG 280
           +  +PVL++ + AQKQ V GL    +KG
Sbjct: 250 IVTLPVLLLTMFAQKQIVAGLTAGAVKG 277