Pairwise Alignments

Query, 291 a.a., polyamine ABC transporter permease from Agrobacterium fabrum C58

Subject, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

 Score =  160 bits (406), Expect = 3e-44
 Identities = 85/263 (32%), Positives = 145/263 (55%), Gaps = 20/263 (7%)

Query: 31  FALLILFFVVPVLILLSRSVTEP--------------------VFGLGNYAELLGSSTYL 70
           F  L LFF++P  I+L  S  E                     V  L NY  L     YL
Sbjct: 26  FIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANYGLLTEDELYL 85

Query: 71  KIFFNTFAVSALVTVVSLAIGFPVAWALAIMPSRLASIVFAILLLSMWTNLLARTYAWMV 130
             +  +  ++   T++ L IGFP+A+A+A       +++  ++++  WT +L R YAWM 
Sbjct: 86  SAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMG 145

Query: 131 LLQRTGVVNKTLMGLGIIDKPLALVNNLTGVTIGMTYIMLPFIIIPLYGVIRKIDPAILQ 190
           +L   G++N  L+  G+ID+PL ++N    V IG+ Y  LPF+I+PL+  + K DP++L+
Sbjct: 146 ILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLE 205

Query: 191 AASLCGASRWQALTRVLIPLAAPGMMAGALMVFVMSLGYFVTPALLGGTANMMLAELIAQ 250
           AAS  G+S + +  ++ +PL+  G++AG ++VF+  +G FV P LLGG   +M+ +++ Q
Sbjct: 206 AASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQ 265

Query: 251 FVQSLVNWGMGGAAAFVLLVVTL 273
              +  +W +  A A V+L + +
Sbjct: 266 EFFNNRDWPVASALAVVMLAILI 288