Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 348 a.a., putative protein from Xanthobacter sp. DMC5

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 82/340 (24%), Positives = 134/340 (39%), Gaps = 26/340 (7%)

Query: 7   LSTCAALFALGAAAQANDLVFSSWGGTTQDAQKAAWAEKFM-----VETGINVLQDGPTD 61
           L   AA    G AA   +L   ++ G  Q+    A  E FM     ++     L      
Sbjct: 10  LCLLAAGLMAGPAAAETNLTVMAYSGLFQERYTKAVLEPFMKAHPDIKVTFFPLPSSAAM 69

Query: 62  YGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDKTK---LDPRFVTDYSV 118
            G L+A   A     DVV ++   +     +GL  K+D + I   K    + R  +   V
Sbjct: 70  LGNLRAQKAAPQA--DVVIMDVSVSKAGTDEGLFTKIDETNIPNVKDLYPNARIPSVAGV 127

Query: 119 GSFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAPGV--IEAALLADGVTA 176
           G  + + V+  N + V   PKSW ++   AK P K        P +  +   L+ +    
Sbjct: 128 GVTFDNLVLLYNAEQVKEAPKSWMEM---AKAPYKGKVVIPGVPDIQGLGLVLILNKANG 184

Query: 177 DKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTA-LEQSGVK 235
              Y   +D+    +  I  ++  W    +    I + +A  G  +N R     EQSG K
Sbjct: 185 GTDYLASVDKGLAAVAEIAPNVQTWEPKPEVYAPIITGQAALGVGYNARAQVNSEQSGGK 244

Query: 236 VETSWAQN--ITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYAPVNIE--- 290
           ++ +  Q   I   +++ +  G    +AA  F+  A S +AQ        YAP N +   
Sbjct: 245 IKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPEAQKSFTETMFYAPTNSKAEI 304

Query: 291 SAKLMDPKIAKSLPDQQTESQVNADMNYWAQHRDEIGERW 330
           +   +D    K+L     +  +  D    AQ RD+I E+W
Sbjct: 305 TGAALDRTAVKNL-----DKVMAVDWIALAQVRDKIAEQW 339