Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 346 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  177 bits (449), Expect = 3e-49
 Identities = 114/338 (33%), Positives = 174/338 (51%), Gaps = 15/338 (4%)

Query: 12  ALFALGA--AAQANDLVFSSWGGTTQDAQ-KAAWAEKFMVETGINVLQDGPTDYGKLKAM 68
           AL  +GA  A    DL   S+GG  + AQ KA +A       G  V  +   +  K+KAM
Sbjct: 11  ALSLMGATQAMAGPDLTVVSFGGANKAAQVKAFYAPWESAGNGKIVAGEYNGEMAKVKAM 70

Query: 69  VEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDKTKLDPR-FVTDYSVGSFYYSFVI 127
           V+   V+WD+V+VE    ++   + + E LD  +   T    +  +    VG F +S V+
Sbjct: 71  VDTKSVSWDLVEVESPELSRGCDEDMFEPLDPKLFGNTADYVKGAIQPCGVGFFVWSTVL 130

Query: 128 GCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAPGVIEAALLADGVTADKLYPL----- 182
             N D +++ P SWAD +DT KFPGKR   K  A   +E AL+ADGV    +Y +     
Sbjct: 131 AYNADKLASAPTSWADFWDTKKFPGKRGLRK-GAKYTLEFALMADGVAPKDVYKVLAGKD 189

Query: 183 DLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTALEQSGVKVETSWAQ 242
             DRAFKKLD +K  I WW  GAQ  Q +AS +    S +NGR+ A+++    ++  W  
Sbjct: 190 GQDRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKES-NLKVVWNG 248

Query: 243 NITAADSLVVPKG--TKNKDAAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKIA 300
            I   D+  +PKG      +AA KFIA +   Q Q   +    Y P N ++  L+   + 
Sbjct: 249 GIYDFDAWAIPKGLAKDRAEAAKKFIAFSVQPQQQKTYSENIAYGPANTQAVPLLAKDVL 308

Query: 301 KSLP--DQQTESQVNADMNYWAQHRDEIGERWYAWQAK 336
           K +P   +   +QV  D+++WA + +++ +R+ +W AK
Sbjct: 309 KDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK 346