Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 362 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 47.8 bits (112), Expect = 4e-10
 Identities = 71/282 (25%), Positives = 108/282 (38%), Gaps = 25/282 (8%)

Query: 46  FMVETGINVLQDGPTDYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDK 105
           F  +TGI  + D       L+  + A    +DVV     + A+    G   KLD + +  
Sbjct: 43  FQAKTGIKPIYDVFDSNETLEGKLLAGRTGYDVVVPSNHFLARQVKAGAFLKLDRAQLPN 102

Query: 106 TK-LDPRFV---------TDYSVGSFYYSFVIGCNVDSVSA-----CPKSWADLFDTA-- 148
            K LDP+ +           +SV   + +  IG NVD V          SWA LF+    
Sbjct: 103 FKNLDPKLLKLLEKNDPGNAHSVPYLWGTNGIGYNVDKVKEVLGIDAIDSWAVLFEPENI 162

Query: 149 -KFPGKRTFYKWSAPGVIEAALLADGVTADKLYPLDLDRAFKKLDTIKSDIIWWSGGAQS 207
            K       +  SA  +  A L   G       P D  +A  KL T++  I ++      
Sbjct: 163 KKLNQCGVAFLDSADELFPAILNYMGKDPRSENPEDYKQAEAKLLTLRPYITYFHSSKYI 222

Query: 208 QQL----IASAEAPFGSVWNGRMTALE-QSGVKVETSWAQNITAA--DSLVVPKGTKNKD 260
             L    I  A    G V+     A E ++GVK+  S  +  +    D L +P    +  
Sbjct: 223 SDLANGNICVAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPADASHPK 282

Query: 261 AAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKIAKS 302
            A  FI      Q  A ++ + GYA  N  +   MDP++  +
Sbjct: 283 EAHAFINYLLDPQVIAKVSASVGYANANPAAKAFMDPELVNN 324