Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 27/280 (9%)

Query: 46  FMVETGINVLQDGPTDYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDK 105
           F   TGI  +QD       L+  + A    +DVV     +  +    G  +KLD +++  
Sbjct: 45  FEKATGIKPVQDVFDSNETLEGKLLAGNTGYDVVVPSNHFLGKQIKAGAFQKLDKNLLPN 104

Query: 106 -TKLDPRFV---------TDYSVGSFYYSFVIGCNVDSVSACP-----KSWADLFDTA-- 148
            + LDP  +           Y+V   + +  IG NVD V A        SWA LF+    
Sbjct: 105 YSNLDPALMKRLEKNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENM 164

Query: 149 -KFPGKRTFYKWSAPGVIEAALLADGVTADKLYPLDLDRAFKKLDTIKSDIIWWSGGAQS 207
            K       +  SA  ++ A L   G+  +   P D  +A +KL  ++  + ++      
Sbjct: 165 KKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYI 224

Query: 208 QQL----IASAEAPFGSVWNGRMTALEQSGVKVETSWAQNITAA----DSLVVPKGTKNK 259
             L    I  A    G V+  +  A E++   V  ++A          D L +PK  KN 
Sbjct: 225 TDLANGDICVAAGFSGDVFQAKARA-EEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNV 283

Query: 260 DAAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKI 299
             A  FI      +  A ++   GYA  N ++  LMD  +
Sbjct: 284 KEAHAFINYLLKPEVIAQVSDYVGYANPNPKAGALMDQAV 323