Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score =  397 bits (1021), Expect = e-115
 Identities = 196/336 (58%), Positives = 233/336 (69%), Gaps = 1/336 (0%)

Query: 2   RSKLVLSTCAALFALGAAAQANDLVFSSWGGTTQDAQKAAWAEKFMVETGINVLQDGPTD 61
           R   VLS      A  AA  A+ L F SWGGTTQDAQK AWA  F   T I V+QDGPTD
Sbjct: 6   RVTAVLSASLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQDGPTD 65

Query: 62  YGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDKTKLDPRFVTDYSVGSF 121
           YGKLKAMVE+  V WDVVDVE D+A +A  +GLLE LDF+ I + K+DPRFV+D+ VGSF
Sbjct: 66  YGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNQIKRDKIDPRFVSDHGVGSF 125

Query: 122 YYSFVIGCNVDSVSAC-PKSWADLFDTAKFPGKRTFYKWSAPGVIEAALLADGVTADKLY 180
           ++SFV+G N   + A  P  W  LFDT  +PGKR  YKW +PGV+E ALLADGV  DKLY
Sbjct: 126 FFSFVLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALLADGVAPDKLY 185

Query: 181 PLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTALEQSGVKVETSW 240
           PLDLDRAFKKLDTIK DI+WW GGAQSQQL+AS EA  G  WNGR+ AL+Q G  V  SW
Sbjct: 186 PLDLDRAFKKLDTIKQDIVWWGGGAQSQQLLASGEASLGQFWNGRVYALQQDGAPVGVSW 245

Query: 241 AQNITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKIA 300
            QN+  AD LV+PKG KNK+AAMKF+A A+SA+ QA+ A  T YAPVN++S   +D  +A
Sbjct: 246 KQNLVMADFLVIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVNVDSVAKLDKDLA 305

Query: 301 KSLPDQQTESQVNADMNYWAQHRDEIGERWYAWQAK 336
            +LP    + QV  D  YWA++   I  RW  W  K
Sbjct: 306 PNLPTAYAQDQVTLDFAYWAKNGQAIAARWNEWLVK 341