Pairwise Alignments

Query, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 67/282 (23%), Positives = 109/282 (38%), Gaps = 25/282 (8%)

Query: 46  FMVETGINVLQDGPTDYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVIDK 105
           F   +GI V+ D       L+  + A    +DVV     + A+    G    LD S +  
Sbjct: 43  FQASSGIKVVYDVFDSNETLEGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPN 102

Query: 106 TK-LDPRFV---------TDYSVGSFYYSFVIGCNVDSVSACP-----KSWADLFDTAKF 150
            + LDP+ +           Y+V   + +  IG NVD V A        SWA LF+    
Sbjct: 103 WQHLDPKLLKQLEQNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENL 162

Query: 151 PGKR---TFYKWSAPGVIEAALLADGVTADKLYPLDLDRAFKKLDTIKSDIIWWSGGAQS 207
              +     +  S   +  A L   G+      P D  +A  +L  ++  I ++      
Sbjct: 163 KKLKQCGVAFMDSPDELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYV 222

Query: 208 QQL----IASAEAPFGSVWNGRMTALE-QSGVKVETSWAQNITAA--DSLVVPKGTKNKD 260
             L    +  A    G V+     A+E ++GVKV  S  +  +    D L +PK   N +
Sbjct: 223 SDLANGDVCIAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPE 282

Query: 261 AAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKIAKS 302
            A+ FI      +  A ++   GYA  N ++   MD  +  +
Sbjct: 283 QALAFINYLLDPKVIAKVSATVGYANANPDAKAYMDASLVNN 324