Pairwise Alignments

Query, 286 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 69.3 bits (168), Expect = 8e-17
 Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 43/275 (15%)

Query: 11  IAVRAKTLLAGAAVTLFAGAAVAQDCTPKISDDHLIKPGHLVMATSPTLPPMAYADQQGV 70
           I+ R    ++ AA++L +GAA+AQD               +V+ T    PP    +  G 
Sbjct: 3   ISTRLLAAVSIAAISLLSGAALAQD--------------KIVIGTEGAYPPFNNLEADGT 48

Query: 71  LKGLRIELGYEIAKRLCLKPEYISTEYATMVPGLQGGRWDMINAGLFVTAER-RKILFMI 129
           L G  I++   + +++  +  +++ ++  ++P LQ  ++D I A + +T ER +K+ F  
Sbjct: 49  LTGFDIDIAKALCEQMKAECTFVTNDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSK 108

Query: 130 PYENLAISISTAVGASDPITKIDDLAGKAV----STDIGGYAERKIKELNEDFKKRGLAP 185
            Y N   +I  AV    PI  IDDL GK++    ST    YAE+   + +          
Sbjct: 109 KYYNTPPAI--AVPKDSPIKSIDDLKGKSLGAQGSTTHSNYAEKHFPDAD---------- 156

Query: 186 MTINLFDNYATVYQALRAGQVQAAVSIDPVAKQY--QDRGEFTHALSGMYPTPG------ 237
             + ++         +  G++ A +    V  ++   D G+    L+ +   P       
Sbjct: 157 --VKMYPTADEYKLDIANGRIDAVIDDIVVLSEWLKTDAGKCCKILTPLKVDPEINGNGA 214

Query: 238 --SLSFGSKDVADAVSAALKEMRADGSLEKLMGGY 270
             ++  G   +AD  +AA+  +RA G  +++   Y
Sbjct: 215 GIAVRKGDTALADKFTAAIAGIRASGKYQEINKKY 249