Pairwise Alignments

Query, 324 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 4e-26
 Identities = 94/332 (28%), Positives = 147/332 (44%), Gaps = 32/332 (9%)

Query: 11  RIGFILVPNFALMSYASAAEPLRAAN-------------LIAGTDLYDAVPLSFDGEAVR 57
           R+  + +P+FAL+ + +  + LR +              ++AG  L          E V 
Sbjct: 6   RLLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSL----------EPVP 55

Query: 58  SSSGIIVSCEALAAAGE-KCHTIFVCAGGGPQDWTAA--ENSYGTLRRLARQGVRIGSIS 114
           SSSG ++  EA+A   +       V  GG     TAA        LR+ A+ GV++  + 
Sbjct: 56  SSSGAVLQVEAIADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVD 115

Query: 115 SGAYVLAAAGLLENRDFTIHWEHAPVLKEAFGHL-TPRQARFVFDGDRITCAGGVAPLDM 173
           +GA++LAA GLL+     +HW H    + AF  L   R+  +  DG+RITCAGG A +D+
Sbjct: 116 NGAFLLAACGLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDL 175

Query: 174 MHAMISQRMGAHFA-RRVSDWYLHTAVAEPGAPQRGSSAERYGTNHPALLTVLEKMETTI 232
             A++S+  G   A + ++D  +        A +   S E        +      M   +
Sbjct: 176 AVALLSRACGRTRALKGLADMLVDETRDSRHALR---SLELGACQGRQVQRAQALMRHHL 232

Query: 233 ESPLDRQTMAKLAGTSARHLDRLFATHLKSSFLETYRAIRLDHARRLLEQSPLSIAEVAF 292
            +PL  + +A   G S R LDR F      S    +  +RL  AR  L  S  S+A++A 
Sbjct: 233 GTPLAVEQLAAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIAD 292

Query: 293 ATGFSSAGHFSGSFKTRFGQTPNAMRQ-RFPL 323
             G   A +     + RFG T   +R   +PL
Sbjct: 293 EVGLGDASYLGKCVRRRFGCTALQLRAGHYPL 324