Pairwise Alignments

Query, 324 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  135 bits (340), Expect = 1e-36
 Identities = 101/312 (32%), Positives = 154/312 (49%), Gaps = 21/312 (6%)

Query: 11  RIGFILVPNFALMSYASAAEPLRAANLIAGTDLYDAVPLSFDGEAVRSSSGI-IVSCEAL 69
           R+ FIL+ +F++ S+  A + L  ANL+   D +   PLS DG+ V S  G+ +V+ E  
Sbjct: 31  RVDFILLEHFSMASFTVAMDVLVTANLLRA-DSFQFTPLSLDGDRVLSDLGLELVATELS 89

Query: 70  AAAGEKCHTIFVCAGGGPQDWTAAENSYGTLRRL----ARQGVRIGSISSGAYVLAAAGL 125
           AAA ++   + VC G            Y  L RL    A  G+ +G + +GA+ L  AG+
Sbjct: 90  AAALKELDLLVVCGG------LRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRAGV 143

Query: 126 LENRDFTIHWEHAPVLKEAFGHLTPRQARFVFDGDRITCAGGVAPLDMMHAMISQRMGAH 185
           L++   +IH E    L E         A F  D DR++ A     +++M  ++ +  G  
Sbjct: 144 LDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDG 203

Query: 186 FARRVSDWYLHTAVAEPGAPQR--GSSAERYGTNHPALLTVLEKMETTIESPLDRQTMAK 243
            A  V +      ++  GA  R  G  A++  + H  L T++E ME  +E  L    +A 
Sbjct: 204 LAEGVEE-----ILSFSGARYRQVGPGAKKSMSLH--LRTIVELMENNLEETLSLDQLAA 256

Query: 244 LAGTSARHLDRLFATHLKSSFLETYRAIRLDHARRLLEQSPLSIAEVAFATGFSSAGHFS 303
            +G S R +DRLF   L +S    Y  +R+  +RRLL+ S LS+ EVA A GF S  HFS
Sbjct: 257 YSGRSRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFS 316

Query: 304 GSFKTRFGQTPN 315
             +   FG  P+
Sbjct: 317 KCYAAYFGYPPS 328