Pairwise Alignments

Query, 303 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 73.2 bits (178), Expect = 7e-18
 Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 18/269 (6%)

Query: 25  LVVFFLAPIAINAVIAFT-----DMGASLRVGEFTMRNFERIVQRDARIPMVLLTTLIYV 79
           L+V F A + +  V+ ++     D  +   VG     ++ R V RD  +   LL   IY 
Sbjct: 19  LLVAFSAVVPMMTVVNYSVQDIFDQSSRYFVGA----DWYRQVLRDPALHDALLRQFIYS 74

Query: 80  TATLFI-FNVGLGALLAMTSTAIPDRLGNFFRGLWLLPRMSPAVLYGILWIWIADPSPSG 138
              L I   +G+G  LAM +     R+ +    +  +P + P  + G +W  I   +  G
Sbjct: 75  ACVLLIEIPLGIGIALAMPTKG---RMASVCLIVMAIPLLIPWNVVGTIW-QIFGRADIG 130

Query: 139 LLNQITATLGLAPINLRNDFPLFLVILANGIVG-ASFAMVILTSAIRSIPSHLANAARVD 197
           LL    A LG++     + F  +L +L   +    S   ++  S +R+IP     AAR+D
Sbjct: 131 LLGASLAKLGVSYNYAGDPFDAWLTVLVMDVWHWTSLVALLCYSGLRAIPDVYYQAARID 190

Query: 198 GASEWGVLRHVVAPALSQPIRFITIYQALSLMTTYEYILLITGGGPVYDSTPYALYIYRR 257
            AS W V RH+  P L   +    + + +     Y    ++TGGGP   +T  +  + R 
Sbjct: 191 RASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVLTGGGPGNATTFLSQTLTRM 250

Query: 258 AFENGAYAYGAALALGLMVIGVAVTLVQW 286
           A   G +  G A A  L V  + + LV W
Sbjct: 251 AV--GQFDLGPAAAFSL-VYFLIILLVSW 276