Pairwise Alignments

Query, 394 a.a., tetracycline resistance protein from Agrobacterium fabrum C58

Subject, 475 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

 Score = 63.9 bits (154), Expect = 9e-15
 Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 12/162 (7%)

Query: 12  VALDAIGAGLIFPILPDILVEVTGGGDIGFLYGVMLGVFAVMQFVFSPILGALSDRFGRR 71
           +A+ AI A ++  ++P I  E+ G      LY  +   F + Q   + + G LSD +GR+
Sbjct: 1   MAMVAIEATIVSTVMPQIASELGGL----HLYSWVFASFLLAQTAMTVVFGKLSDLYGRK 56

Query: 72  PVLLLSLAGTLLDYLVMAFSPLGWVLVVGRAMAGI-TSANMAVASAYITDITPAEQRAQR 130
           P++ + +A  +L  ++  F+     ++  R + GI   A   V+   + D+ PA +R + 
Sbjct: 57  PIMFVGIAIFVLGSVLAGFAWSMPAMICFRLIQGIGAGAIQPVSLTIVGDLYPARERGKV 116

Query: 131 FGTVGAVMSLGFIIGPVIGGVI-----GAW--WLRAPFLVAA 165
            G + +V ++  ++GP+IG +I      AW  W+  P  +AA
Sbjct: 117 QGYLASVWAVSAVVGPMIGALIVQKLSWAWIFWVNVPIGLAA 158



 Score = 42.4 bits (98), Expect = 3e-08
 Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 7/110 (6%)

Query: 260 AQAFLVGPLSRRFGDLGTLMIGVGFDMLAYMLMAFANQSWMGYAVAPLFALGGVAMPALQ 319
           A   + G LS  +G    + +G+   +L  +L  FA   W   A+     + G+   A+Q
Sbjct: 41  AMTVVFGKLSDLYGRKPIMFVGIAIFVLGSVLAGFA---WSMPAMICFRLIQGIGAGAIQ 97

Query: 320 SLVTSRVSD----DQQGQLQGVLASLMSLAGIIGPVLTTAVFFSTKSIWI 365
            +  + V D     ++G++QG LAS+ +++ ++GP++   +       WI
Sbjct: 98  PVSLTIVGDLYPARERGKVQGYLASVWAVSAVVGPMIGALIVQKLSWAWI 147