Pairwise Alignments

Query, 394 a.a., tetracycline resistance protein from Agrobacterium fabrum C58

Subject, 409 a.a., putative Transporter from Pseudomonas putida KT2440

 Score = 78.2 bits (191), Expect = 4e-19
 Identities = 82/344 (23%), Positives = 136/344 (39%), Gaps = 55/344 (15%)

Query: 44  GVMLGVFAVMQFVFSPILGALSDRFGRRPVLLLSLAGTLLDYLVMAF---SPLGWV---- 96
           G  + V  V+  + +   G  +DR GRR +LLL  AG  L Y ++       L W+    
Sbjct: 62  GAAVTVAGVVWVLLARPWGRAADRLGRRRILLLGSAGFTLAYWLLCLFVEGALRWMPGAT 121

Query: 97  -----LVVGRAMAGITSANMAVA-SAYITDITPAEQRAQRFGTVGAVMSLGFIIGPVIGG 150
                L++ R   G   A + V  +A I D    ++RA+   ++GA  ++G ++GP +  
Sbjct: 122 LAFIGLMIARGCIGAFYAAIPVGYNALIADHVEPQRRARAMASLGAANAVGLVVGPALAA 181

Query: 151 VIGAWWLRAPFLVAALFNGLNLFVALF-----VLPESRKAGPGKFAFKELNPLAPLVWLW 205
           ++    L  PF + +L       V  F      LP S    P +     L    PL  L 
Sbjct: 182 LLARHSLSLPFHIMSLLPATAFLVLFFTLKPQALPHSHAPSPVRLNDPRLR--RPL--LV 237

Query: 206 NFKPLLPLVTVSVVFGLVAAIPGTIWVLYGAERFGWDSVHM---------GLSLSVFGVS 256
            F  +L +    ++ G                 F  D +H+         G++L+  GV+
Sbjct: 238 AFSAMLSVTVSQIIVGF----------------FALDRLHLGPAEAAQAAGIALTTVGVA 281

Query: 257 GALAQAFLVGPLSRRFGDLGTLMIGVGFDMLAYMLMAFANQS---WMGYAVAPLFALGGV 313
             LAQ  L       +  L  + +G     L +   + A  +   W  Y VA   A  G 
Sbjct: 282 LMLAQVIL---RQLEWPPLKMIRVGATVSALGFACGSLATTAPWLWACYFVAA--AGMGF 336

Query: 314 AMPALQSLVTSRVSDDQQGQLQGVLASLMSLAGIIGPVLTTAVF 357
             PA  +L  + +   +QG   G + +   +  +IGP+  T V+
Sbjct: 337 VFPAFSALAANAMQASEQGATAGSIGAAQGMGAVIGPLAGTLVY 380



 Score = 38.9 bits (89), Expect = 3e-07
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 115 SAYITDITPAEQRAQRFGTVGAVMSLGFIIGPVIGGVIGAWWLRAPFLVAALFNGLNLFV 174
           SA   +   A ++    G++GA   +G +IGP+ G ++ A   R PFL  A+   L L V
Sbjct: 342 SALAANAMQASEQGATAGSIGAAQGMGAVIGPLAGTLVYALDPRLPFLAVAV---LLLLV 398

Query: 175 ALFVLPESRK 184
            L+ +P  ++
Sbjct: 399 GLWPMPREQR 408