Pairwise Alignments

Query, 394 a.a., tetracycline resistance protein from Agrobacterium fabrum C58

Subject, 393 a.a., Bcr/CflA family multidrug resistance transporter from Pseudomonas putida KT2440

 Score = 60.5 bits (145), Expect = 8e-14
 Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 13/190 (6%)

Query: 62  GALSDRFGRRPVLLLSLAGTLLDYLVMAFSPLGWVLVVGRAMAGITS-ANMAVASAYITD 120
           G ++DRFGRR  L+  +    L  L  A++P    LVV R +  +   A M ++ A ++D
Sbjct: 60  GPVADRFGRRKPLMFGVTLFTLASLACAYAPNLDTLVVARFIQALGGCAGMVLSRAIVSD 119

Query: 121 ITPAEQRAQRFGTVGAVMSLGFIIGPVIGGVIG--AWWLRAPFLVAALFN-GLNLFVALF 177
                  A+ F  +  VM L  I+ P++GGV+   A W ++ FL  +LF+ G  L V+L 
Sbjct: 120 KCDPVASAKVFSQLMLVMGLAPILAPMLGGVLVNLAGW-QSIFLALSLFSAGCLLAVSLG 178

Query: 178 V---LPESRKAGPGKFAFKE-LNPLAPLVWLWNFKPLLPLVTVSVVFGLVAAIPGTIWVL 233
           +   LPE     P   A ++ L  LA  V+L +   L   + ++ +F  +A  P     L
Sbjct: 179 LPESLPEHIPRQPLSGALRQYLRLLADRVFLGH--ALTGGIAIAGMFAYIAGSPFVFIKL 236

Query: 234 YG--AERFGW 241
           YG  AE +GW
Sbjct: 237 YGVPAEHYGW 246



 Score = 40.4 bits (93), Expect = 9e-08
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 236 AERFGWDSVHMGLSLSVFGVSGALAQAFLVGPLSRRFGDLGTLMIGVGFDMLAYMLMAFA 295
           A+ F  D  H+  +L+ + +  ++ Q    GP++ RFG    LM GV    LA +  A+A
Sbjct: 31  AQAFATDEKHVQATLAAYFLGLSIGQ-LAYGPVADRFGRRKPLMFGVTLFTLASLACAYA 89

Query: 296 NQSWMGYAVAPLFALGGVA-MPALQSLVTSRVSDDQQGQLQGVLASLMSLAGIIGPVL 352
                      + ALGG A M   +++V+ +       ++   L  +M LA I+ P+L
Sbjct: 90  PNLDTLVVARFIQALGGCAGMVLSRAIVSDKCDPVASAKVFSQLMLVMGLAPILAPML 147