Pairwise Alignments

Query, 394 a.a., tetracycline resistance protein from Agrobacterium fabrum C58

Subject, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

 Score = 71.2 bits (173), Expect = 6e-17
 Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 13  ALDAIGAGLIFPILPDILVEVTGGGDIGFLYGVMLGVFAVMQFVFSPILGALSDRFGRRP 72
           A   +G  ++ P+L    +++ G      L G+ +G + + Q V     G +SDR GRRP
Sbjct: 25  AFRMLGMFMVLPVLATYGMDLAGATPA--LIGLAIGAYGLTQAVLQIPFGMISDRIGRRP 82

Query: 73  VLLLSLAGTLLDYLVMAFSPLGWVLVVGRAMAGITSANMAVASAYITDITPAEQRAQRFG 132
           V+ L L    L  ++ A +   W ++ GR + G  + + AV  A ++D+T  + R +   
Sbjct: 83  VIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAV-MALLSDLTREQHRTKAMA 141

Query: 133 TVGAVMSLGFIIGPVIGGVI-GAWWLRAPFLVAALFNGLNLFVALFVLPES 182
            +G  + L F +  V+G ++  A+ L   FLV A    + + +  FV+P +
Sbjct: 142 MIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLIAFVVPST 192



 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 8/175 (4%)

Query: 211 LPLVTVSVVFGLVAAIPGTIWVLYGAERFGWDSVHMGLSLSVFGVSGALAQAFLVGPLSR 270
           L LV    + G+   +P  +   YG +  G     +GL++  +G++ A+ Q    G +S 
Sbjct: 20  LALVFAFRMLGMFMVLP--VLATYGMDLAGATPALIGLAIGAYGLTQAVLQ-IPFGMISD 76

Query: 271 RFGDLGTLMIGVGFDMLAYMLMAFANQSWMGYAVAPLFALGGVAMPALQSLVTSRVSDDQ 330
           R G    + +G+    L  +L A A+  W G     +    G    A+ +L++    +  
Sbjct: 77  RIGRRPVIYLGLVIFALGSVLAAQADSIW-GVIAGRILQGAGAISAAVMALLSDLTREQH 135

Query: 331 QGQLQGVLASLMSL----AGIIGPVLTTAVFFSTKSIWIGTIWLVGAALYLLALP 381
           + +   ++   + L    A ++GP+LT+A   S   +    + LVG  L    +P
Sbjct: 136 RTKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLIAFVVP 190