Pairwise Alignments

Query, 395 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 382 a.a., galactonate dehydratase from Pseudomonas simiae WCS417

 Score =  186 bits (472), Expect = 1e-51
 Identities = 131/401 (32%), Positives = 214/401 (53%), Gaps = 29/401 (7%)

Query: 1   MKIDRMRVFVTRDKDRPR-VIVALDTDDGMTGWGECYNHGPDLALPPVLDYLYNFLAGQD 59
           MKI ++  F+      PR   + ++TD G+TGWGE    G    +   ++ L ++L G+D
Sbjct: 1   MKITKLTTFIVP----PRWCFLKVETDQGVTGWGEPVVEGRAHTVAAAVEELSDYLIGKD 56

Query: 60  PTRVEFLYNLMLQQNRFPPGALGLSAISALDHCLWDLAAKAVGVPVYKLLGGEVRNRIKV 119
           P  +E ++ ++ +   +  GA+ +SA++ +D  LWD+  KA+GV V  LLGG+VR++I+V
Sbjct: 57  PRNIEDIWTVLYRGGFYRGGAVHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRV 116

Query: 120 YA---GVYTAPDAPAARDEFDRLNEGWGFSAFKLSPWRVDIHAHRWGEVVRSSAEYFRTL 176
           Y+   G   A  A AA++   R     GF+A K++    ++      E V  +      +
Sbjct: 117 YSWIGGDRPADTARAAKEAVAR-----GFTAVKMNGTE-ELQFVDSFEKVDLALANVAAV 170

Query: 177 RETVRADYDIAFDAHAKIFEPSAARQLGNALAPYDPLFYEEPLRPENIEMYGDLKQGLNC 236
           R+ V  +  I  D H ++ +P A + L   L PY  +F EEP+  EN E   +L    + 
Sbjct: 171 RDAVGPNVGIGVDFHGRVHKPMA-KVLMKELDPYKLMFIEEPVLSENYEALKELAPLTST 229

Query: 237 TLATGESLYNRNEFLRLLQVKGADIIQPDICVVGGISEMRRIATLAEAHFVSIAPHNPMG 296
            +A GE L++R +F R+L     DIIQPD    GGI+E R+IA +AEA+ V++A H P+G
Sbjct: 230 PIALGERLFSRWDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLG 289

Query: 297 PLATAVNVHFCAVQQNFRILEYRLPKGQVYAYGGNDLVKEEDVTRYVVDP--YLPRDGYL 354
           P+A A  +   AV  N  I E  L         G    +  D+  YV DP  +    G++
Sbjct: 290 PIALAACLQLDAVCYNAFIQEQSL---------GIHYNESNDLLDYVRDPGVFDYDQGFV 340

Query: 355 ELRPDRPGWGVEMDEKAMQEDGYV--HWQRRVPKRPDGSYA 393
           ++ P+ PG G+E++E+ + E   +   W+  + +  DGS+A
Sbjct: 341 KI-PNGPGLGIEINEEYVIERAAIGHRWRNPIWRHADGSFA 380