Pairwise Alignments

Query, 568 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  438 bits (1126), Expect = e-127
 Identities = 250/544 (45%), Positives = 343/544 (63%), Gaps = 34/544 (6%)

Query: 7   LLEVRNLVTEFPLRTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSILQIIDSP-G 65
           L+EVR+L  EF     V R V+ +SF I  G+TL +VGESGSGKSVTA SIL+++  P  
Sbjct: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65

Query: 66  YITSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTVGDQITE 125
              SGSI   + +G  +    L    + ++ +RG  IAMIFQEPM+SL+P+H +  QI E
Sbjct: 66  RHPSGSI---RYEGKDL----LQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINE 118

Query: 126 VLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMALACKPQL 185
           +L LH  ++  +A A  +ELL  V IP P K L     + SGG RQR MIAMALA +P+L
Sbjct: 119 ILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPEL 178

Query: 186 LIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMHHGVVKE 245
           LIADEPTTALDVT Q +IL+L+  LQ   GMA+L I+HD+ +V +IA  V VM  G + E
Sbjct: 179 LIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVE 238

Query: 246 YGTVEQIFHKPQDPYTRMLIGSVLKLEQKAEIRLARPPLDQTAAPILEVKDLSMHF---- 301
                 +F  PQ  YT+MLI +              P  +   AP+LEV DL + F    
Sbjct: 239 QAECATLFSSPQHHYTQMLINAEPS---------GLPAHNPVGAPLLEVDDLKVWFPIKK 289

Query: 302 -------GEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRLYDPTAGEMLYRRAD 354
                    +KA+DGV+  L  G+TLGIVGESGSGK+T+G +I+RL     G   + +  
Sbjct: 290 GFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQ-- 347

Query: 355 GSVVDLSKIEGKELKAARRELRMVFQDPFGSLNPRMTVAQVIGEPLLVNGIAKGKELEER 414
               +L  +  K ++  RRE+++VFQDPFGSL+PRM VA ++GE L ++ I   +E E  
Sbjct: 348 ----NLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAA 403

Query: 415 VCSLMEQVGLDPSGRERYPHAFSGGQRQRIGIARAITLRPRIIVADEATSALDVSVRFQV 474
           + + +E+VGLDP  R RYPH FSGGQRQRI IARA+ L+P +I+ DE TSALD +V+ QV
Sbjct: 404 IIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQV 463

Query: 475 LDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVEVGEAEKVCNAPDHPYTQA 534
           ++LL  LQ +  L Y+FISHD+ V++ +  ++ V+  G +VE G+A+ + +AP HPYT+ 
Sbjct: 464 VELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQ 523

Query: 535 LLSA 538
           LL A
Sbjct: 524 LLEA 527



 Score =  178 bits (452), Expect = 4e-49
 Identities = 109/266 (40%), Positives = 162/266 (60%), Gaps = 25/266 (9%)

Query: 291 ILEVKDLSMHF--GEM--KALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRLYDPTAG 346
           ++EV+DL++ F  G+   + +DGVS  +  GETL +VGESGSGK+    SI+RL      
Sbjct: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYP-- 63

Query: 347 EMLYRRADGSVVDLSKIEGKEL-----KAARR----ELRMVFQDPFGSLNPRMTVAQVIG 397
             L R   GS+    + EGK+L     K  +R     + M+FQ+P  SLNP   + + I 
Sbjct: 64  --LARHPSGSI----RYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQIN 117

Query: 398 EPLLVNGIAKGKELEERVCSLMEQVGLDPSGRERY---PHAFSGGQRQRIGIARAITLRP 454
           E LL++    GKE   R   L++ VG+ P  R+R    PH  SGGQRQR+ IA A+   P
Sbjct: 118 EILLLHKGLTGKEATARTLELLDMVGI-PEPRKRLKALPHELSGGQRQRVMIAMALANEP 176

Query: 455 RIIVADEATSALDVSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKL 514
            +++ADE T+ALDV+V+ ++L+LL +LQ  +G+A + ISHD+ ++R +  RV VM RG++
Sbjct: 177 ELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQI 236

Query: 515 VEVGEAEKVCNAPDHPYTQALLSAIP 540
           VE  E   + ++P H YTQ L++A P
Sbjct: 237 VEQAECATLFSSPQHHYTQMLINAEP 262



 Score =  172 bits (437), Expect = 2e-47
 Identities = 102/267 (38%), Positives = 156/267 (58%), Gaps = 22/267 (8%)

Query: 6   PLLEVRNLVTEFPLRTGVF-------RAVNDISFSIEPGKTLCVVGESGSGKSVTARSIL 58
           PLLEV +L   FP++ G         +AV+ ++FS+  G+TL +VGESGSGKS    +IL
Sbjct: 274 PLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAIL 333

Query: 59  QIIDSPGYITSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHT 118
           ++I S G I        +  G +++        +A+R +R  ++ ++FQ+P  SLSP   
Sbjct: 334 RLISSQGGI--------RFHGQNLE----GLNQKAVRPLR-REMQVVFQDPFGSLSPRMC 380

Query: 119 VGDQITEVLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMA 178
           V D + E LR+H   +  +  A  I  L +V +    +   RY  ++SGG RQR  IA A
Sbjct: 381 VADIVGEGLRIHRIGTAQEQEAAIIAALEEVGL--DPRTRHRYPHEFSGGQRQRIAIARA 438

Query: 179 LACKPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVM 238
           L  KP L++ DEPT+ALD T Q ++++L+  LQ+ + +  LFI+HD+ VV  ++  ++V+
Sbjct: 439 LVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVI 498

Query: 239 HHGVVKEYGTVEQIFHKPQDPYTRMLI 265
            HG V E G  + IFH PQ PYTR L+
Sbjct: 499 KHGHVVEQGDAQAIFHAPQHPYTRQLL 525