Pairwise Alignments

Query, 568 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 533 a.a., ABC transporter ATP-binding protein from Magnetospirillum magneticum AMB-1

 Score =  437 bits (1123), Expect = e-127
 Identities = 259/551 (47%), Positives = 356/551 (64%), Gaps = 38/551 (6%)

Query: 1   MKPAKPLLEVRNLVTEFPLRTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSILQI 60
           M    PLL V +L   F    G  +AV  +SF++  G+TL +VGESGSGKSVTA SILQ+
Sbjct: 1   MSENTPLLVVDDLAVSF----GPVQAVKGVSFTLAKGETLALVGESGSGKSVTALSILQL 56

Query: 61  IDSPGYI-TSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTV 119
           +  P      GSI L   DG+ + +   +P   A+R VRG  IAM+FQEPM+SL+P+H++
Sbjct: 57  LPYPRATHPRGSIRL---DGAEL-VGAPEP---ALRKVRGGRIAMVFQEPMTSLNPLHSI 109

Query: 120 GDQITEVLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMAL 179
             Q+ EVL LHL +  +  R   +ELL  V IP PEK L     + SGG RQR MIAMAL
Sbjct: 110 EAQVGEVLELHLGLRGSTLRDRVVELLSLVGIPEPEKRLGALPHELSGGQRQRVMIAMAL 169

Query: 180 ACKPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMH 239
           A +P +LIADEPTTALDVT QA+IL L+  LQ   GMA+LFITHD+G+V ++AD V VM+
Sbjct: 170 AGEPDILIADEPTTALDVTIQAQILALLKGLQARLGMALLFITHDLGIVRKMADRVCVMN 229

Query: 240 HGVVKEYGTVEQIFHKPQDPYTRMLIGSVLKLEQKAEIRLARPPLDQTAAPILEVKDLSM 299
            G + E G + Q+F  P  PYT+ L+ +    E K +   A     +    ++  +DL +
Sbjct: 230 AGEIVESGPLPQVFDAPAHPYTQRLLAA----EPKGKPHRA----GEGEPVVMAARDLKV 281

Query: 300 HF-----------GEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRLYDPTAGEM 348
            F           G +KA+DG+S+ L  G T+G+VGESGSGKTT+G +++RL D + GE+
Sbjct: 282 WFPLKAGLWRKTVGHVKAVDGISLDLKRGHTIGVVGESGSGKTTLGLALLRLLD-SDGEI 340

Query: 349 LYRRADGSVVDLSKIEGKELKAARRELRMVFQDPFGSLNPRMTVAQVIGEPLLVNGIA-K 407
            +         +  +    L+  RR+++MVFQDP+GSL+PRM+V Q++GE L V+  A  
Sbjct: 341 SF-----GGTRIESMSAGTLRPLRRQMQMVFQDPYGSLSPRMSVGQIVGEGLEVHEPAMH 395

Query: 408 GKELEERVCSLMEQVGLDPSGRERYPHAFSGGQRQRIGIARAITLRPRIIVADEATSALD 467
             E +  + + +E+VGLDP+ R+RYPH FSGGQRQRI IARA+ L+P+ IV DE TSALD
Sbjct: 396 AAERDRLIAAALEEVGLDPATRDRYPHEFSGGQRQRIAIARALVLKPKFIVLDEPTSALD 455

Query: 468 VSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVEVGEAEKVCNAP 527
           VSV+ Q++DLL  LQ    LAY+FISHD+ V+R + D + VM  GK+VE G A+++  AP
Sbjct: 456 VSVQAQIVDLLRDLQARHALAYLFISHDLRVVRALADDLLVMKDGKVVEAGRADELFKAP 515

Query: 528 DHPYTQALLSA 538
              YT+AL++A
Sbjct: 516 RTAYTRALMAA 526



 Score =  192 bits (489), Expect = 2e-53
 Identities = 117/266 (43%), Positives = 167/266 (62%), Gaps = 19/266 (7%)

Query: 290 PILEVKDLSMHFGEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRLYDPTAGEML 349
           P+L V DL++ FG ++A+ GVS  L  GETL +VGESGSGK+    SI++L       + 
Sbjct: 6   PLLVVDDLAVSFGPVQAVKGVSFTLAKGETLALVGESGSGKSVTALSILQL-------LP 58

Query: 350 YRRAD---GSV-VDLSKIEGKELKAARR----ELRMVFQDPFGSLNPRMTVAQVIGEPLL 401
           Y RA    GS+ +D +++ G    A R+     + MVFQ+P  SLNP  ++   +GE L 
Sbjct: 59  YPRATHPRGSIRLDGAELVGAPEPALRKVRGGRIAMVFQEPMTSLNPLHSIEAQVGEVLE 118

Query: 402 VNGIAKGKELEERVCSLMEQVGLDPSGRERY---PHAFSGGQRQRIGIARAITLRPRIIV 458
           ++   +G  L +RV  L+  VG+ P   +R    PH  SGGQRQR+ IA A+   P I++
Sbjct: 119 LHLGLRGSTLRDRVVELLSLVGI-PEPEKRLGALPHELSGGQRQRVMIAMALAGEPDILI 177

Query: 459 ADEATSALDVSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVEVG 518
           ADE T+ALDV+++ Q+L LL  LQ  LG+A +FI+HD+G++R M DRV VM  G++VE G
Sbjct: 178 ADEPTTALDVTIQAQILALLKGLQARLGMALLFITHDLGIVRKMADRVCVMNAGEIVESG 237

Query: 519 EAEKVCNAPDHPYTQALLSAIPRPDP 544
              +V +AP HPYTQ LL+A P+  P
Sbjct: 238 PLPQVFDAPAHPYTQRLLAAEPKGKP 263



 Score =  175 bits (443), Expect = 5e-48
 Identities = 106/273 (38%), Positives = 155/273 (56%), Gaps = 21/273 (7%)

Query: 7   LLEVRNLVTEFPLRTGVFR-------AVNDISFSIEPGKTLCVVGESGSGKSVTARSILQ 59
           ++  R+L   FPL+ G++R       AV+ IS  ++ G T+ VVGESGSGK+    ++L+
Sbjct: 273 VMAARDLKVWFPLKAGLWRKTVGHVKAVDGISLDLKRGHTIGVVGESGSGKTTLGLALLR 332

Query: 60  IIDSPGYITSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTV 119
           ++DS G I+ G   +      S+    L P  R ++        M+FQ+P  SLSP  +V
Sbjct: 333 LLDSDGEISFGGTRIE-----SMSAGTLRPLRRQMQ--------MVFQDPYGSLSPRMSV 379

Query: 120 GDQITEVLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMAL 179
           G  + E L +H     A  R   I    + E+       DRY  ++SGG RQR  IA AL
Sbjct: 380 GQIVGEGLEVHEPAMHAAERDRLIAAALE-EVGLDPATRDRYPHEFSGGQRQRIAIARAL 438

Query: 180 ACKPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMH 239
             KP+ ++ DEPT+ALDV+ QA+I+DL+  LQ  H +A LFI+HD+ VV  +ADD+LVM 
Sbjct: 439 VLKPKFIVLDEPTSALDVSVQAQIVDLLRDLQARHALAYLFISHDLRVVRALADDLLVMK 498

Query: 240 HGVVKEYGTVEQIFHKPQDPYTRMLIGSVLKLE 272
            G V E G  +++F  P+  YTR L+ +   LE
Sbjct: 499 DGKVVEAGRADELFKAPRTAYTRALMAAAFDLE 531