Pairwise Alignments

Query, 568 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 632 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  472 bits (1214), Expect = e-137
 Identities = 260/571 (45%), Positives = 374/571 (65%), Gaps = 35/571 (6%)

Query: 5   KPLLEVRNLVTEFPLRTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSILQIIDSP 64
           +P+LE+ +L   F  R+G   A+  +SFS+  G+ + VVGESGSGKSVT+ +++ ++ + 
Sbjct: 20  QPVLEIDDLSVSFSGRSGTHLALKGVSFSLNKGEVVAVVGESGSGKSVTSLTVMGLLAAS 79

Query: 65  GYITSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTVGDQIT 124
             I  G I      G   DL  +    R  R +RG D+AMIFQEPM+SL+PV  VGDQ+T
Sbjct: 80  ARIERGGIRFIDNAGRRHDLLTMKDDAR--RRLRGRDMAMIFQEPMTSLNPVLKVGDQLT 137

Query: 125 EVLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMALACKPQ 184
           E L  H     A A  +A ELLR+V I + ++ ++ Y    SGGMRQR MIA ALAC PQ
Sbjct: 138 EALLDHQMCDAASAERKARELLRKVRIADIDRVMNSYPHSLSGGMRQRVMIAQALACDPQ 197

Query: 185 LLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMHHGVVK 244
           LLIADEPTTALDVT QA IL ++  LQ+   M+VLFITHDMGVVA+IAD V+VM+ G V 
Sbjct: 198 LLIADEPTTALDVTVQARILQILRDLQRQSNMSVLFITHDMGVVAEIADRVVVMYRGEVV 257

Query: 245 EYGTVEQIFHKPQDPYTRMLIGSVLKLEQKAEI-----------RLARPPLDQTAA---- 289
           E GTV+ IF++PQ  YT+ L+ +V +L    +            + A P  D T A    
Sbjct: 258 EQGTVDAIFNRPQHDYTKALLAAVPRLGDMRDSAWPKRFPLLGQQNAAPEQDHTTARYDA 317

Query: 290 -PILEVKDLSMHF-----------GEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSI 337
            P+L+++ L +++             + A++ +   + PGETL IVGESG GK+T GR++
Sbjct: 318 PPLLDIRGLKVYYPIRSGILSSVTHRVHAVEQIDFTVWPGETLAIVGESGCGKSTTGRAL 377

Query: 338 MRLYDPTAGEMLYRRADGSVVDLSKIEGKELKAARRELRMVFQDPFGSLNPRMTVAQVIG 397
           +RL +  +  +L+   DG   +++ +  ++ +  RR+++MVFQDP+ SLNPR+TV   I 
Sbjct: 378 LRLVESQSDSLLF---DGQ--EIAGLRDRDFQPLRRKMQMVFQDPYASLNPRLTVGFTIA 432

Query: 398 EPLLVNGIAKG-KELEERVCSLMEQVGLDPSGRERYPHAFSGGQRQRIGIARAITLRPRI 456
           EPLL++G+AK  ++   +V +L++ VGL P   +RYPH FSGGQRQRI IARA+ L+P++
Sbjct: 433 EPLLLHGLAKSLEDATPQVQALLKSVGLLPEHAQRYPHEFSGGQRQRIAIARAMALQPQV 492

Query: 457 IVADEATSALDVSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVE 516
           I+ADEA SALDVS++ QV++L+M LQ + G+++IFISHD+ V+  + +RV VMY G++VE
Sbjct: 493 IIADEAVSALDVSIQAQVVNLMMDLQQKTGVSWIFISHDMAVVERIANRVAVMYLGQIVE 552

Query: 517 VGEAEKVCNAPDHPYTQALLSAIPRPDPRDR 547
           +G  + V N P HPYT+ LL+++P  DP  R
Sbjct: 553 IGPRQSVFNNPQHPYTRRLLASVPIADPNRR 583



 Score =  183 bits (464), Expect = 2e-50
 Identities = 109/281 (38%), Positives = 165/281 (58%), Gaps = 12/281 (4%)

Query: 285 DQTAAPILEVKDLSMHF----GEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRL 340
           D    P+LE+ DLS+ F    G   AL GVS  L  GE + +VGESGSGK+    ++M L
Sbjct: 16  DPAPQPVLEIDDLSVSFSGRSGTHLALKGVSFSLNKGEVVAVVGESGSGKSVTSLTVMGL 75

Query: 341 YDPTA----GEMLYRRADGSVVDLSKIEGKELKAAR-RELRMVFQDPFGSLNPRMTVAQV 395
              +A    G + +    G   DL  ++    +  R R++ M+FQ+P  SLNP + V   
Sbjct: 76  LAASARIERGGIRFIDNAGRRHDLLTMKDDARRRLRGRDMAMIFQEPMTSLNPVLKVGDQ 135

Query: 396 IGEPLLVNGIAKGKELEERVCSLMEQVGLDPSGR--ERYPHAFSGGQRQRIGIARAITLR 453
           + E LL + +      E +   L+ +V +    R    YPH+ SGG RQR+ IA+A+   
Sbjct: 136 LTEALLDHQMCDAASAERKARELLRKVRIADIDRVMNSYPHSLSGGMRQRVMIAQALACD 195

Query: 454 PRIIVADEATSALDVSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGK 513
           P++++ADE T+ALDV+V+ ++L +L  LQ +  ++ +FI+HD+GV+  + DRV VMYRG+
Sbjct: 196 PQLLIADEPTTALDVTVQARILQILRDLQRQSNMSVLFITHDMGVVAEIADRVVVMYRGE 255

Query: 514 LVEVGEAEKVCNAPDHPYTQALLSAIPR-PDPRDRDRTRRF 553
           +VE G  + + N P H YT+ALL+A+PR  D RD    +RF
Sbjct: 256 VVEQGTVDAIFNRPQHDYTKALLAAVPRLGDMRDSAWPKRF 296



 Score =  182 bits (461), Expect = 5e-50
 Identities = 115/273 (42%), Positives = 171/273 (62%), Gaps = 22/273 (8%)

Query: 4   AKPLLEVRNLVTEFPLRTGVF-------RAVNDISFSIEPGKTLCVVGESGSGKSVTARS 56
           A PLL++R L   +P+R+G+         AV  I F++ PG+TL +VGESG GKS T R+
Sbjct: 317 APPLLDIRGLKVYYPIRSGILSSVTHRVHAVEQIDFTVWPGETLAIVGESGCGKSTTGRA 376

Query: 57  ILQIIDSPGYITSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPV 116
           +L++++S     S S++    DG   ++A L  R R  + +R   + M+FQ+P +SL+P 
Sbjct: 377 LLRLVES----QSDSLLF---DGQ--EIAGL--RDRDFQPLR-RKMQMVFQDPYASLNPR 424

Query: 117 HTVGDQITEVLRLH-LKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMI 175
            TVG  I E L LH L  S   A  +   LL+ V +  PE A  RY  ++SGG RQR  I
Sbjct: 425 LTVGFTIAEPLLLHGLAKSLEDATPQVQALLKSVGL-LPEHA-QRYPHEFSGGQRQRIAI 482

Query: 176 AMALACKPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDV 235
           A A+A +PQ++IADE  +ALDV+ QA++++L+  LQ+  G++ +FI+HDM VV +IA+ V
Sbjct: 483 ARAMALQPQVIIADEAVSALDVSIQAQVVNLMMDLQQKTGVSWIFISHDMAVVERIANRV 542

Query: 236 LVMHHGVVKEYGTVEQIFHKPQDPYTRMLIGSV 268
            VM+ G + E G  + +F+ PQ PYTR L+ SV
Sbjct: 543 AVMYLGQIVEIGPRQSVFNNPQHPYTRRLLASV 575