Pairwise Alignments

Query, 568 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 550 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  400 bits (1029), Expect = e-116
 Identities = 225/549 (40%), Positives = 334/549 (60%), Gaps = 32/549 (5%)

Query: 6   PLLEVRNLVTEFPLRTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSILQIIDSPG 65
           P+LE+ ++   +    G    V  +SF+I+PG+ + +VGESGSGK+ TA++++ ++   G
Sbjct: 14  PVLELEDVAIAYRDDDGERTVVEGVSFAIQPGEVVALVGESGSGKTTTAQAVIGLLADNG 73

Query: 66  YITSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTVGDQITE 125
            +T G+I LN AD S     +LD       ++RG  ++++ Q+P SSL+PV T+G+Q+ E
Sbjct: 74  RLTRGAIRLNGADISRWSQPRLD-------SIRGRVVSLVPQDPGSSLNPVKTIGEQVDE 126

Query: 126 VLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMALACKPQL 185
           +LRLH K  + + R + + LL +V +  PE    +Y  + SGGM+QR +IA+A+A KP L
Sbjct: 127 ILRLHQKSDRRRLRRQTLALLTRVGLTEPELRAGQYPHELSGGMKQRVLIAIAIALKPAL 186

Query: 186 LIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMHHGVVKE 245
           +IADEPT+ALDVT Q  ILDL+  L++ +G A+LF+THD+ V A+ AD +LV   G ++E
Sbjct: 187 IIADEPTSALDVTVQKRILDLLDELRRENGTAILFVTHDLAVAAERADRLLVFQKGYIQE 246

Query: 246 YGTVEQIFHKPQDPYTRMLIGSVLKLEQKAEIRLARPPLDQTAA-------PILEVKDLS 298
            G   Q+   PQ  Y R L+ ++  L        AR P    A+       PI++V+ L 
Sbjct: 247 QGPTRQVLSAPQSQYARTLLANIPSLAP------ARRPSRADASDQPIFSQPIVQVEQLV 300

Query: 299 MHF-------GEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRLYDPTAGEMLYR 351
             F          +A+D VS  + PG T  IVGESGSGKTT  R I+    PTAG +L  
Sbjct: 301 QEFPLTGSRKQPFRAVDAVSFSVAPGTTHAIVGESGSGKTTTARMILGFQRPTAGRIL-- 358

Query: 352 RADGSVVDLSKIEGKELKAARRELRMVFQDPFGSLNPRMTVAQVIGEPLLVNGIAKGKEL 411
             DG+  D++++ G+ L+  R+ +++V+Q+PF SL+P   +  ++ EPL         E 
Sbjct: 359 -IDGT--DITQLRGEALRQFRQTIQLVYQNPFSSLDPSQRLFDIVEEPLRNFNRYTRTER 415

Query: 412 EERVCSLMEQVGLDPSGRERYPHAFSGGQRQRIGIARAITLRPRIIVADEATSALDVSVR 471
             RV  + E+V L  S  +R P   SGGQRQR+ IARA+ L P+++V DEA SALDV+V+
Sbjct: 416 ANRVHEIFERVALPASLLQRRPAELSGGQRQRVAIARALVLEPKVLVLDEAVSALDVTVQ 475

Query: 472 FQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVEVGEAEKVCNAPDHPY 531
            Q+L LL +LQ  LGL Y+FISHD+ V+R + D V V+Y GK VE G  E++   P   Y
Sbjct: 476 AQILRLLEELQASLGLTYLFISHDLAVVRQIADTVSVLYHGKQVESGPVEQIFARPAERY 535

Query: 532 TQALLSAIP 540
           T+ L+ AIP
Sbjct: 536 TRELIDAIP 544



 Score =  165 bits (418), Expect = 4e-45
 Identities = 101/268 (37%), Positives = 159/268 (59%), Gaps = 8/268 (2%)

Query: 287 TAAPILEVKDLSMHF----GEMKALDGVSIKLLPGETLGIVGESGSGKTTMGRSIMRLYD 342
           T  P+LE++D+++ +    GE   ++GVS  + PGE + +VGESGSGKTT  ++++ L  
Sbjct: 11  TTTPVLELEDVAIAYRDDDGERTVVEGVSFAIQPGEVVALVGESGSGKTTTAQAVIGLLA 70

Query: 343 PTAGEMLYRRADGSVVDLSKIEGKELKAAR-RELRMVFQDPFGSLNPRMTVAQVIGEPLL 401
              G +       +  D+S+     L + R R + +V QDP  SLNP  T+ + + E L 
Sbjct: 71  DN-GRLTRGAIRLNGADISRWSQPRLDSIRGRVVSLVPQDPGSSLNPVKTIGEQVDEILR 129

Query: 402 VNGIAKGKELEERVCSLMEQVGL-DPSGRE-RYPHAFSGGQRQRIGIARAITLRPRIIVA 459
           ++  +  + L  +  +L+ +VGL +P  R  +YPH  SGG +QR+ IA AI L+P +I+A
Sbjct: 130 LHQKSDRRRLRRQTLALLTRVGLTEPELRAGQYPHELSGGMKQRVLIAIAIALKPALIIA 189

Query: 460 DEATSALDVSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVEVGE 519
           DE TSALDV+V+ ++LDLL +L+ E G A +F++HD+ V     DR+ V  +G + E G 
Sbjct: 190 DEPTSALDVTVQKRILDLLDELRRENGTAILFVTHDLAVAAERADRLLVFQKGYIQEQGP 249

Query: 520 AEKVCNAPDHPYTQALLSAIPRPDPRDR 547
             +V +AP   Y + LL+ IP   P  R
Sbjct: 250 TRQVLSAPQSQYARTLLANIPSLAPARR 277