Pairwise Alignments

Query, 374 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 308 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  149 bits (377), Expect = 8e-41
 Identities = 86/228 (37%), Positives = 137/228 (60%), Gaps = 9/228 (3%)

Query: 141 DKTRPLFLFGADRLGRDVFSRVVQGSQISLSIGLVGVFFSLLLGVVLGGISGYYGGRIDF 200
           DK     L G D+LGRD  SR++ G+++SL+IGLV V  +  +G+ LG ++GY+GGR+D 
Sbjct: 81  DKGSWAHLLGTDKLGRDYLSRLLFGARVSLAIGLVSVMLAGTIGIALGVLAGYFGGRVDA 140

Query: 201 VMQRVIDFVLSLPTIPIWLAMAAALPQGWPATLQYMMITIILSLTGWAQLARVVRGRFLS 260
           V+  ++   L+LP I + LA+A+ +  G    +  M++ ++L    W +   V R     
Sbjct: 141 VVSYLLTVRLALPVILVALALASLV--GGSVKVVIMLLGLLL----WDRFLIVSRSVTRQ 194

Query: 261 LRTEEFVAAARLDGVPEGRIIFRHMLPSFSSHIIASVTLAVPAMILAETSLSFLGLGLQP 320
           LR  EF+AAA+  G     I+ R +LP+    +    TL +   +L E +LSFLGLG+QP
Sbjct: 195 LREAEFIAAAQTLGASSLFIMLREILPNLLGPLTVVATLEIAHAVLLEATLSFLGLGVQP 254

Query: 321 PTISWGVLLREAQNIRSIATAPW-LFLPGVAVVVAVMALNLLGDGLRD 367
           P  SWG+++ E +    +   PW + +PGV + + V+++NL+GDGLRD
Sbjct: 255 PMPSWGLMVAEGK--AYMFFQPWVIVIPGVVLALLVLSINLVGDGLRD 300



 Score = 23.5 bits (49), Expect = 0.008
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 31 HRLAMAALVVTIAMYVVALVPGFFAINDPVLQNARATFYPP 71
          H      LV+  AM ++AL+    + +DP  Q+      PP
Sbjct: 37 HHGMTLGLVILGAMVLLALLAPLISPHDPYAQDVSRRLIPP 77