Pairwise Alignments

Query, 649 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 5e-20
 Identities = 103/450 (22%), Positives = 181/450 (40%), Gaps = 94/450 (20%)

Query: 102 LVRWNMDFTEVLPNLAEKWEVSPDASEFTFHLIEGAK------WSDGHPFTADDVVFAIE 155
           L ++    TEV P LA  W++S D   +TFHL +G K      +S    F ADDV+F   
Sbjct: 61  LTQFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFN 120

Query: 156 DCIKNKELY-SATPAQ--------LSVAGKAVDVSKVDDFTVKFKFAAPNALYLENLATP 206
             +  +  +  A P++        L+   K+VD  K+DD TV+F     +A +++NLA  
Sbjct: 121 RLLDAQSPFRQAYPSESPYFTDMGLNTTIKSVD--KLDDHTVRFNLNNVDASFVQNLA-- 176

Query: 207 LGQHPTLFPKHYCSKFLPKYNAALDAEVKAAGVSSWTELFRAKCGDIEIPSRWSNVDKPT 266
                      + S    +Y A L  + KA  ++                       KP 
Sbjct: 177 ---------MSFASVQSAEYAAQLLKQGKAEEIN----------------------QKPV 205

Query: 267 -LDPWVVKEPYSGGATRVVMTRNPYFWQVDTDGNQLPYINEINFGISQDVESLMLNVISG 325
              P+V K        R V   N  +W+ +        ++ + F I+ D  S +  + +G
Sbjct: 206 GTGPFVFKRYQKDSQIRYV--ANKQYWKPED-----VKLDNLVFAITPDAASRLQKLKAG 258

Query: 326 KIDI----QERHISVLANKPTLSQNMEKGNYRLMTLVPSAAQQCQIYLNITHKDPAMRKM 381
           +  +    +   I V+   P L   +++  + L  L            N+TH  P + ++
Sbjct: 259 ECQVSGYPRPADIEVMKQDPNL-HVLQQAGFNLGFLA----------YNVTH--PPLDQL 305

Query: 382 FADKSFRQALSLGLNRQEIIEIVYFGQSEAYQTGPRPTHPWYHEKLARQSTEFDADKANE 441
                 RQAL + +++  II+ VY    +  Q    P   W ++   + +  +D  KA  
Sbjct: 306 ----KVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQ-WSYDPTIKDA-PYDPTKAKA 359

Query: 442 LLDKAGYDKKNGNGIRLRPDGQPIFFSIDVIPTLYPDLVDTLELVKAQWAQIGVDIKVNT 501
           LL +AG          + P      +++ V     P+   + ++++  W ++G+   + +
Sbjct: 360 LLKEAG----------VAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVS 409

Query: 502 IERALYYTRGDDNAHDAAV--WPGPGGLDP 529
            E   Y  R  +  HDA +  W G  G DP
Sbjct: 410 YEWGEYIKRAKNGEHDAMIYGWTGDNG-DP 438