Pairwise Alignments

Query, 649 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 89.4 bits (220), Expect = 4e-22
 Identities = 105/443 (23%), Positives = 171/443 (38%), Gaps = 80/443 (18%)

Query: 102 LVRWNMDFTEVLPNLAEKWEVSPDASEFTFHLIEGAKWSDG------HPFTADDVVFAIE 155
           LV +    T V+P LA KW++SPD   +TFHL EG K+           F ADDV+F   
Sbjct: 62  LVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFN 121

Query: 156 DCIKNKELY-SATPAQ------LSVAGKAVDVSKVDDFTVKFKFAAPNALYLENLATPLG 208
             +     +  A P +      +S+      V K D  TV       +A +++N+A    
Sbjct: 122 RMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFA 181

Query: 209 QHPTLFPKHYCSKFLPKYNAALDAEVKAAGVSSWTELFRAKCGDIEIPSRWSNVDKPTLD 268
               +    Y  + L K     D   K  G                              
Sbjct: 182 ---AILSAEYAEQLL-KAGKPSDINQKPIGTG---------------------------- 209

Query: 269 PWVVKEPYSGGATRVVMTRNPYFWQVDTDGNQLPYINEINFGISQDVESLMLNVISGKID 328
           P+V +        R V   N  +W    D +++  ++++ F I+ D    +  + +G+  
Sbjct: 210 PFVFQRYQKDSQIRYVA--NKQYW----DPSRVK-LDQLIFAINTDASVRVQKLKAGECQ 262

Query: 329 IQERHISVLANKPTLSQNMEKGNYRLMTLVPSAAQQCQIYLNITHKDPAMRKMFADKSFR 388
           +       L  +P    +  K +  L  L         I  N+ HK       F     R
Sbjct: 263 V------TLHPRPA-DVDALKADPNLKLLTKPGFNLGYIAYNVRHKP------FDQLEVR 309

Query: 389 QALSLGLNRQEIIEIVYFGQSEAYQTGPRPTHPWYHEKLARQSTEFDADKANELLDKAGY 448
           QAL + +N+Q I+  VY G  +       PT   Y + +  +   ++ +KA ELL  AG 
Sbjct: 310 QALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSI--KDAAYNPEKAKELLKAAGV 367

Query: 449 DKKNGNGIRLRPDGQPIFFSIDVIPTLYPDLVDTLELVKAQWAQIGVDIKVNTIERALYY 508
             K G  I L        +++ V     P+     E++++ WA+IG+ +K+ + E   Y 
Sbjct: 368 --KEGTEITL--------WAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYI 417

Query: 509 TRGDDNAHDAAV--WPGPGGLDP 529
            R  +  HD ++  W G  G DP
Sbjct: 418 KRTKNGEHDVSLIGWTGDNG-DP 439