Pairwise Alignments

Query, 649 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 79.0 bits (193), Expect = 5e-19
 Identities = 117/509 (22%), Positives = 201/509 (39%), Gaps = 91/509 (17%)

Query: 100 QSLVRWNMDFTEVLPNLAEKWEVSPDASEFTFHLIEGAKWSDGHPFTADDVVFAIEDCIK 159
           + L++++ D     P LA KW +SPD   +TF L +G KW DG  FT+ DV ++IE   K
Sbjct: 66  EGLLKYDYDVNPQ-PQLATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIELLKK 124

Query: 160 NKELYSATPAQLSVAGKAVDVSKVDDFTVKFKFAAPNALYLENLATPLGQHPTLFPKHYC 219
                  T A L+    A+D    D +T   + + P A YL  +   +     + PKH  
Sbjct: 125 IHPRGRNTFANLT----AIDTP--DKYTAILRLSKP-APYL--IRALVATETPIVPKHIY 175

Query: 220 SKFLPKYNAALDAEVKAAGVSSWTELFRAKCGDIEIPSRWSNVDKPTLDPWVVKEPYSGG 279
               P  N   +A +                                  P+  KE   G 
Sbjct: 176 EGTDPANNPNNNAPIGTG-------------------------------PFKFKEWVRG- 203

Query: 280 ATRVVMTRNPYFWQVDTDGNQLPYINEINFGISQDVESLMLNVISGKIDIQER------H 333
            + +V  RN  +W         P+++++      D  +  +   +G +D+  R       
Sbjct: 204 -SHIVYERNNDYWD-----KPKPFVDQLIVRFVTDPAAAAVAFETGTVDLGYRTPVPLAD 257

Query: 334 ISVLANKPTLSQNMEKGNYRLMTLVPSAAQQCQIYLNITHKDPAMRKMFADKSFRQALSL 393
           +  L   P L    +  +Y        ++   ++  N+ +      + F ++  RQA++ 
Sbjct: 258 LERLKKVPALRFETKGNSY--------SSNVTRLEFNLDN------EYFKNEKVRQAVAH 303

Query: 394 GLNRQEIIEIVYFGQSEAYQTGPRPTHPWYHEKLARQSTEFDADKANELLDKAGYDKKNG 453
            ++R  I+++V +G  +   +   P    +H+  A     FD  KAN LLD+AG+ KK G
Sbjct: 304 AIDRNVIVKVVNYGYGQVSYSPIAPGLKAFHDP-APSPYAFDVKKANALLDEAGFPKKAG 362

Query: 454 NGIRLRPDGQPIFFSIDVIPTLYPDLVDTLELVKAQWAQIGVDIKVNTIERALYYTRGDD 513
            G+R      P+ F  + I    P L D L   ++  A+IG+ + V   + + +  R   
Sbjct: 363 -GVRF---SVPLDF--NPIGADGPRLADYL---RSALARIGIAVTVRAQDPSAFIKRIYT 413

Query: 514 NAHDAAVWPGPGGL-DPMLDPRDFFAFHPQGSRYAIPWALWYTSNGQKGEEPPESQKKRF 572
           +   A    G   L DP +  +    +  +     +P+     SNG   + P        
Sbjct: 414 DRDFAFTHNGASNLFDPTVGVQRL--YWSKNFIKGVPF-----SNGTHYQNPVVD----- 461

Query: 573 KLFDEARSTADIAKRGEFMKQIFDIAAEE 601
           KL ++A    D  KR +  K   D  A +
Sbjct: 462 KLLEDAAVENDPGKRLKLFKDFQDTVARD 490