Pairwise Alignments

Query, 649 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 123/462 (26%), Positives = 178/462 (38%), Gaps = 83/462 (17%)

Query: 89  DHNGILRMVGNQSLVRWNMDFTEVLPNLAEKWEVSPDASEFTFHLIEGAKWSDGHPFTAD 148
           +H  +LR V  +SL   +     ++P LA+ WEV  DA  +TFHL E   +S+G  F A 
Sbjct: 55  EHRVLLRNVV-ESLTDQDPQTGRIIPWLAKTWEVGADALSYTFHLREDVTFSNGERFDAH 113

Query: 149 DVVFAIEDCIKNKELYSATPAQLSVAGKA--VDVSKVDDFTVKFKFAAPNALYLENLATP 206
            V  A +    NK   S  PA       A       +DDFTV+   A PNA +L+  AT 
Sbjct: 114 AVKTAFD---SNKAFASQLPATFGATYLAGYDHAEVIDDFTVRLVLAKPNAGFLQ--ATS 168

Query: 207 LGQHPTLFPKHYCSKFLPKYNAALDAEVKAAGVSSWTELFRAKCGDIEIPSRWSNVDKPT 266
                 L P  Y           L A+ ++ G    T  F                   T
Sbjct: 169 TTNLAILAPASY----------RLSAQQRSLGKIIGTGPF-------------------T 199

Query: 267 LDPWVVKEPYSGGATRVVMTRNPYFWQVDTDGNQ-LPYINEINFGISQDVESLMLN--VI 323
           LD +    P  G     ++ R  Y W      NQ   Y++ ++  IS   E  + N   +
Sbjct: 200 LDHYT---PEVGAR---LLKRADYAWPSANVRNQGAAYLDAVD--ISYIPEESVRNGLFL 251

Query: 324 SGKIDIQERHISVLANKPTLSQNMEKGNYRLMTLVPSAAQQCQIYLNITHKDPAMRKMFA 383
            GK+DI         ++  L     KG       +P  A    +Y N T  D    ++  
Sbjct: 252 QGKVDILWPRNPF--SEVDLQLFQSKGATIQSRSLPGPAM--NLYPN-TRND----RLLG 302

Query: 384 DKSFRQALSLGLNRQEIIEIVYFGQSEAYQTGPRPTHPWYHEKLARQSTEFDADKANELL 443
           D+  R AL   ++R      VY             T P++  K       +D   A +LL
Sbjct: 303 DRQVRLALQKAIDRTSYAHTVYNTAFPVVSGVYDVTTPFF--KAQTDKLAYDPKGAEQLL 360

Query: 444 DKAGYDK-------KNGNGIRLRPDGQPIFFSIDVIPTLYPDLVDTLELVKAQWAQIGVD 496
           D AG+ K       KNG  + LR +  P   + DV             LV+ Q  ++G+D
Sbjct: 361 DAAGWHKGDDGYRHKNGQRLTLRYNLTPAESAGDV-------------LVQDQLRKVGID 407

Query: 497 IKVNTIERALYYTRGDDNAHDAA----VWPGPGGLDPMLDPR 534
           +K+N + RA + T     A+D          P  L  +LDPR
Sbjct: 408 LKLNVLTRAEWVTGNSTGAYDLTSTYMTRADPIILQTILDPR 449